Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0445 ATGACGCCGAACCTGGAAATAAAGAAAGAGACTTCGGTTGTAGATCTTGAGAAGGCTGCTGTTCATGATGATTATAAAGATGAAATTGCTCCTAATCCTGTGGCTGTGGACCCTCGTCCTGGATTAGATTTTGAGCAATTAAGGTATGAAGCCCAGCATCGGTGGCTGAGGCCTTCTGAAATCTGTGAAATTCTCCGAAATTATCGTATGTTTGCAATCACTTCAGAGCCTCCGAACAGGCCCCCAAGTGGTTCGCTCTTTCTTTTTGATCGGAGGGTGTTGATAATCTTTAGAAGGGATGGGCATAATTGGAGGAAGAAAAGCGATGGGAAGACTGTGAAGGAAGCTCATGAAAGGGTGAAGGTGGGAAGTACTGACGATGAATTGTATTGCTACTATGCCCATGGGGAAGAAAATGAAAAATTTCAGAGGCGAAGCTGTTGGATGCTTGAAAAGGACATTATGAGCATAGTTTTGGTCCAATACTTGGAAGTAAAGGGTATCAAACAAAAGCTCAGATCTCCATCTCCATCAAGAGGTACATATGCCATGAGCTCAACGAGTACTTTGTCTTCCTTACATGATGTTGATTCAGAAGATTCCTAG 606 0.4307 MTPNLEIKKETSVVDLEKAAVHDDYKDEIAPNPVAVDPRPGLDFEQLRYEAQHRWLRPSEICEILRNYRMFAITSEPPNRPPSGSLFLFDRRVLIIFRRDGHNWRKKSDGKTVKEAHERVKVGSTDDELYCYYAHGEENEKFQRRSCWMLEKDIMSIVLVQYLEVKGIKQKLRSPSPSRGTYAMSSTSTLSSLHDVDSEDS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0445 201 ProSiteProfiles CG-1 DNA-binding domain profile. 44 171 IPR005559 GO:0003677
Prci11g0445 201 MobiDBLite consensus disorder prediction 173 201 - -
Prci11g0445 201 MobiDBLite consensus disorder prediction 174 194 - -
Prci11g0445 201 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 43 191 - -
Prci11g0445 201 SMART CG_1_2 47 166 IPR005559 GO:0003677
Prci11g0445 201 Pfam CG-1 domain 50 164 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0445 Prci-Chr11 4770629 4771835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0445 40 201 CAMTA Transcription Factor Family AT5G64220 62.644 4.12e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0445 K21596 - pcin:129284976 413.305