Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0441 ATGGCTATAGATGGAGGAAATATTAATCAGGAAGTTATTCATGGATCACCCACTAGAAGAAGCTATTACAAACGTGCTCAAGGGGGTTGCTCTGATAGAAATCGACTGCTGCAATCTACAGAAGACATGACTATTGTTGAAATAAATCCCCAGGGAACACACACTTTCACACAAGCCTCCCGTGTATCAGATTCCTCTATGAATAATCAGCTTCAGCTTGACTTAATGACTCAATTTGGAGTTGATATTGATATTAACAGTCATAAAGGTGGGATATTTAGTGATCAAGACAGGTACATATGCAAGCAGAAGTCACGATCACGATGGAGGGTCCTGAAACACTGCATCAAATTTGTACGCATATTGTCTGATACAGCAAACAAAATAAAGATTGATGGCTATAGATGGGGGAAATATAACCAGGAAGTTATTCCTGGATCACCCACCCCAAGCAACTATTACAAAAGTGTTCAAGGGGATAGCTCTGATAGAAAGCAACTGCGGCAACCTACAGAAGACCCGACTATTGTTGAAATCACTCACGAGAGAAGACACACATTCACACAAGCCTCCTGTGTAACAGATTCCTTCATGAATAATCAGCTTGAGTTAATGACTCAATTTGGGATATTTGATATGAACGACCTTACAGGTAAGTCTGATACTTTGAGTGCCATAACCTCATTTACTTCATTAAATATGCTAAACTAA 711 0.3938 MAIDGGNINQEVIHGSPTRRSYYKRAQGGCSDRNRLLQSTEDMTIVEINPQGTHTFTQASRVSDSSMNNQLQLDLMTQFGVDIDINSHKGGIFSDQDRYICKQKSRSRWRVLKHCIKFVRILSDTANKIKIDGYRWGKYNQEVIPGSPTPSNYYKSVQGDSSDRKQLRQPTEDPTIVEITHERRHTFTQASCVTDSFMNNQLELMTQFGIFDMNDLTGKSDTLSAITSFTSLNMLN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0441 236 SMART WRKY_cls 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0441 236 ProSiteProfiles WRKY domain profile. 10 54 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0441 236 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 97 195 IPR044810 GO:0003700
Prci11g0441 236 SUPERFAMILY WRKY DNA-binding domain 129 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0441 236 ProSiteProfiles WRKY domain profile. 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0441 236 Gene3D WRKY domain 116 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0441 236 MobiDBLite consensus disorder prediction 147 173 - -
Prci11g0441 236 Pfam WRKY DNA -binding domain 132 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0441 Prci-Chr11 4756853 4758157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0441 10 185 WRKY Transcription Factor Family AT5G07100 26.966 5.93e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g0441 WRKY 8.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0441 - K13424 pcin:129287239 481.87