Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0440 ATGGCTATAGATGGAGGAAATATTAATCAGGAAGTTATTCATGGATCACCCACTAGAAGCTATTACAAACGTGCTCAAGGGGGTTGCTCTGATAGAAATCGACTGCTGCAATCTACAGAAGACATGACTATTGTTGAAATAAATCCCCAGGGAACACACACTTTCACACAAGCCTCCCGTGTATCAGATTCCTCTATGAATAATCAGCTTCAGCTTGACTTAATGACTCAATTTGGAGTTGATATTGATATTAACAGTCATAAAGGTGGGATATTTAGTGATCAAGACAGGTACATATGCAAGCAGAAGTCACGATCACGATGGAGGGTCCTGAAACACTGCATCAAATTTGTACGCATATTGTCTGATACAGCAAACAAAATAAAGATTGATGGCTATAGATGGGGGAAATATAACCAGGAAGTTATTCCTGGATCACCCACCCCAAGCAACTATTACAAAAGTGTTCAAGGGGATAGCTCTGATAGAAAGCAACTGCGGCAACCTACAGAAGACCCGACTATTGTTGAAATCACTCACGAGAGAAGACACACATTCACACAAGCCTCCTGTGTAACAGATTCCTTCATGAATAATCAGCTTGAGTTAATGACTCAATTTGGGATATTTGATATGAACGACCTTACAGGTAAGTCTGATACTTTGAGTGCCATAACCTCATTTACTTCATTAAATATGCTAAACTAA 708 0.3941 MAIDGGNINQEVIHGSPTRSYYKRAQGGCSDRNRLLQSTEDMTIVEINPQGTHTFTQASRVSDSSMNNQLQLDLMTQFGVDIDINSHKGGIFSDQDRYICKQKSRSRWRVLKHCIKFVRILSDTANKIKIDGYRWGKYNQEVIPGSPTPSNYYKSVQGDSSDRKQLRQPTEDPTIVEITHERRHTFTQASCVTDSFMNNQLELMTQFGIFDMNDLTGKSDTLSAITSFTSLNMLN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0440 235 Pfam WRKY DNA -binding domain 131 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0440 235 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0440 235 MobiDBLite consensus disorder prediction 146 171 - -
Prci11g0440 235 SUPERFAMILY WRKY DNA-binding domain 128 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0440 235 Gene3D WRKY domain 115 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0440 235 ProSiteProfiles WRKY domain profile. 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0440 235 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 97 194 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0440 Prci-Chr11 4756853 4758157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0440 10 184 WRKY Transcription Factor Family AT5G07100 26.966 1.25e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g0440 WRKY 8.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0440 - K13424 pcin:129287239 475.322