Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0439 ATGGCACAAGATTTGAATATCAACACAGAGGATCACCTGTTGCCATGGGAGGTTTTCTGCCGAAATATTGGCACTCCGATTTTAGAATCGTCTTATTCCAAGAGATCAATGGCCGCGAGTATAGTTAAAGATTGCGGTGGCCATCTTCTTGCCGGAGTCATTGTAGCAAAGTCACTGAGGAACGCAAATTATGTTGAAGATTGGGAACGTGCTCTGCACAAATTGTGTTCGCTCCATCCTTCCTACGACGTTGGCATGTTTCAAGACCAGAGCAGTGTCATGCTTAAAGCATTCATAAACTTCATCTGGCATGATTTAAGCAAGACAAAAAAGTATTGTCTTACATCATGTTTATTCATTTCTAAATTTGGGAAGCCTGAAAATGAGTTGATCAATGATTGGATTTCTTCTCGATTAGTGGTTGCTGGAGAAGCAGAGCATAATTTGAGAGCGCTTGTGGACTGTTTTGCCTTGTTGCAATTAGAGGACACCAAGTCAAGGTATATTCAAATTCCACAAGACACACATGCTATCTTGCAACTATTAAACACTCAGAATCCTTTGTTCATGAAAAAATCTGAGTTCGGGTTGGTTGAACCACAAAATGGTGAGCTATGGCATAGTGCTATATATATTGATTTGGCGGACAATAAGTTGGCTGAGCTACCTTTGTCCCCGAATTGTCATGAACTCAAAGTGTTAAAGCTGAACAACAATGCTGACTTGACAAAAATCCCACCCCTTTTCTTCTTCAAAATGCCCCTACTTTGCATCTTGGATCTGTCCTACTCTAGTGTGAGAGAATTACCGAACTCTTTTTTTGAGTTGGAGCAACTTAGAGAACTCTACATGAAAGGTTGTGAACGCTTCATGAAACTATCCTCAGAGGTTGGAAAATTGAAGAACCTTGAAAGCCTTGATCTTGACAAGACTCAGATCATACATCTCCCACAAGAGATCCAAGAGTTGACCAATCTCCAAAGTTTGATTCTTTGTTTTTATGAGTACCATGGCAAGAAAAGCATGCAATATACGAGTTCAACAATTATTCCTTCTGGGGTGATTTCAAAACTTAAAGGGTTAAAACATTTAAGCATTGATGTGAACCCTGATGATGAGCGATGGCAAGAGAATTTACAAGTCATTTTACCAGAAGTCTCGGTATTAGAGTGCTTGCAAACCGTTAATTTGTACATTCCAGAACTTGAACTGTTGAATCTCATCCCTGCTCGCATTTTTAAGCTTGATTTCAGATTCATTGTTGGCAAACATATGTCACGGATCATTTCAAGTACACTACCCACAATTGAAGAAAAATTTAAACGAAGTGAGTGTAGCTTGAAGTTTGTGAAAGGTGTTGATGTCCCCTATGAAATAACAAGTGCTATTAGACATAGCAAAGCTTTGTTTTTAGATCGACACTTGTCTATCAAGGATCTCTCAATGTTTGGCAGGATGAATATAGAGCAATTACAAGTTTGTATGCTGGCTGAATGTAAAGAGATGCGAACGATTGTTGATGTAAGATGGTCTACTGTATTTGAGGATATATTTCCCCGTTTGTTGGTGTTGAGTGTATCGTACATGAAGAATCTGAGGAGCATTTGTGAAGGACGAGTTCATTCCAAGCACTGCTTTGGTATGTTGAAGACCTTAGAATTGTACAATTGTCCAAAGTTAACAACTGTTTTCACCTTGGATTTTCTGGGCAACCTTTCACTCTTGAAGGTTCTTCTACTCAAAGATTGTCCAAAAATAAGCGCTTTGATATCTTGCGGATCATTTGAACTGAGAGTTGGTACTTTCCTCCCTAAATTAAGAACAATGACACTTCTCCATCTTCCTGAACTGATCAGCATTTCCAATGGATTACACATGGGCCCATGTTTGGAAAACATAGGAGTCTATGATTGTCCAAAACTTCAGACTCTTTCGAAAATGGAATTGTCAAGTCAAAATTTGAAAGTCATCAACGGAGAAACCATGTGGTGGGAGGCATTAACATGGAGTGACGCAGAATGGGGAATAGTTGGCCGGCCATCTATTTTTGATTGCATCTTTTCTCCAATAGATAAACAGGCTGACATTATGAGTCAACTGAAGTTGGATGATGATATTGATGACAGTCCAGCGGACCAGCCATTGCAGTGTTCCATTGGCAAGATCCCTGAGGACACGAGTCGTCGTATCACAACGACAGGCGGGGCAGTGTGTGAGCCATTACAGCCTTCTAGTGTCAAGGTCTCCAAGTACGGGAAGAGAAAGAACAAGGAGAAAACGACAATGATAACCAAGTCTCTTGACGATGGATACTTTTGGAGAAAATATGGTCAGAAATTAGTTCGTAATTCCAAATTTCCAAGAAAGTATCTCATGTGCACTCATAGATGTGATGAGGGTTGTCAAGCTACCAGACAAGTGCAGAGAATTGACGACAAGCCTCACCTTTACAGTATCACTTATTCTGGGAAACACACTTGCACACAAGCCTCCGGTGTAACAAATTCCTCCATGAATAATCAGGTTGACGTGATGACTCAACTTGGGGTAGATGACACTGACGACAGTCCCGACGGGGGAATAGTGGATGAGCCATTACGACCTTCCAATGACGAGGTCTTCAAGGACAAAATGCATTATTGGAAGAGAGAAGTCACTTCTAGATGGACAAAGCAATCCAAGTCTCTTGACGATGGATACAGTTGGAGGAAATATGGCCAGAAAGGCTTTCTTGGAGCCAAATTTCCAAGAGGATACTACAGATGCACTCACAAGGGTTGCCTAGCTTCCAAAGAGGTGCAGAGAGATGACGAGGAGCCTTTCCTTTACAATATCACCTATCGTGGCCGTCACACTTGCAGACAAACCTCTAGTGCAACAAATTCCTCCATGAATAATCAGGCTGACTTAAAGACACAACACGGGGTAGATGATAATGACGACTTTGATCCGGAATCTTTGCGAGGAGTTTGA 2973 0.4104 MAQDLNINTEDHLLPWEVFCRNIGTPILESSYSKRSMAASIVKDCGGHLLAGVIVAKSLRNANYVEDWERALHKLCSLHPSYDVGMFQDQSSVMLKAFINFIWHDLSKTKKYCLTSCLFISKFGKPENELINDWISSRLVVAGEAEHNLRALVDCFALLQLEDTKSRYIQIPQDTHAILQLLNTQNPLFMKKSEFGLVEPQNGELWHSAIYIDLADNKLAELPLSPNCHELKVLKLNNNADLTKIPPLFFFKMPLLCILDLSYSSVRELPNSFFELEQLRELYMKGCERFMKLSSEVGKLKNLESLDLDKTQIIHLPQEIQELTNLQSLILCFYEYHGKKSMQYTSSTIIPSGVISKLKGLKHLSIDVNPDDERWQENLQVILPEVSVLECLQTVNLYIPELELLNLIPARIFKLDFRFIVGKHMSRIISSTLPTIEEKFKRSECSLKFVKGVDVPYEITSAIRHSKALFLDRHLSIKDLSMFGRMNIEQLQVCMLAECKEMRTIVDVRWSTVFEDIFPRLLVLSVSYMKNLRSICEGRVHSKHCFGMLKTLELYNCPKLTTVFTLDFLGNLSLLKVLLLKDCPKISALISCGSFELRVGTFLPKLRTMTLLHLPELISISNGLHMGPCLENIGVYDCPKLQTLSKMELSSQNLKVINGETMWWEALTWSDAEWGIVGRPSIFDCIFSPIDKQADIMSQLKLDDDIDDSPADQPLQCSIGKIPEDTSRRITTTGGAVCEPLQPSSVKVSKYGKRKNKEKTTMITKSLDDGYFWRKYGQKLVRNSKFPRKYLMCTHRCDEGCQATRQVQRIDDKPHLYSITYSGKHTCTQASGVTNSSMNNQVDVMTQLGVDDTDDSPDGGIVDEPLRPSNDEVFKDKMHYWKREVTSRWTKQSKSLDDGYSWRKYGQKGFLGAKFPRGYYRCTHKGCLASKEVQRDDEEPFLYNITYRGRHTCRQTSSATNSSMNNQADLKTQHGVDDNDDFDPESLRGV 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0439 990 Gene3D WRKY domain 752 830 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 Gene3D WRKY domain 882 956 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 Gene3D Ribonuclease Inhibitor 487 662 IPR032675 -
Prci11g0439 990 MobiDBLite consensus disorder prediction 954 990 - -
Prci11g0439 990 SUPERFAMILY WRKY DNA-binding domain 891 955 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 555 837 IPR044810 GO:0003700
Prci11g0439 990 Gene3D Ribonuclease Inhibitor 177 421 IPR032675 -
Prci11g0439 990 SMART WRKY_cls 896 955 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 SMART WRKY_cls 767 829 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 SUPERFAMILY WRKY DNA-binding domain 764 829 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 ProSiteProfiles WRKY domain profile. 767 825 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 MobiDBLite consensus disorder prediction 973 990 - -
Prci11g0439 990 Pfam Leucine rich repeat 230 287 IPR001611 GO:0005515
Prci11g0439 990 SUPERFAMILY L domain-like 203 648 - -
Prci11g0439 990 ProSiteProfiles WRKY domain profile. 891 951 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 MobiDBLite consensus disorder prediction 954 972 - -
Prci11g0439 990 Pfam WRKY DNA -binding domain 897 954 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0439 990 Pfam WRKY DNA -binding domain 768 827 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0439 Prci-Chr11 4714246 4720791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0439 893 980 WRKY Transcription Factor Family AT5G07100 36.364 1.82e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g0439 WRKY 1.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0439 - - pcin:129286634 1994.16