Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0433 ATGGCTACTGAGGACTATGAACTGGTCAAGACTATTGATGACACTAAAGAAGCTTCCTCCCTTATTGTTAGAGTGATTAGGAAGTGGTGCCAGCTCTATAAGAGTCCCCCTCATCATTTAGCATGTATTATGTTCGTTTTTATAGATGAAGAGGGCAATAAGATACATGCTGAAGTCACAAACAAACAACTTCATGAGCAGTATAAGCGAGAGCCATCTGAAGGAGACATCATTTACATTGAAAATTTCACAATTTCACCTAACACATGGCCTTATAGACCCACATCTCATCCATGGAGGCTGCAGTTCCATCCTAACACTTACATTAGACCTCATGATGCTGAGCTTCCACGCAATTCATTCAACTTTGTCTGTTTTACAAAACTTCACGAGGACATGAAAAAAAAAGAACTTAACACTGAAGTTCTTATTGATGTCATTGGCTTTTTGAAATCATTTGGTGATCTGATAGACTCAAGGACAGATAATGCAGCACAAAATCGTTTAAGCTATACTTTAGCAGATGAAGAGGATGTCACTGTTAACTGCTTATTATGGGGAGAGACTGCAACACAAACATATTGGGCCAAGCAGGATGACATGGACCCACCAATTATTGTATTGATGCAATTTGCTAGGATCAGTGTGAAAAATGGAATTTTGCAACTGTCAAACTCCTACACTGCTACTAGGATCACCTTTAACCCTGACATTCCAGAGGCAAAGGACCTACTTGAAAGGCTTCAACAGTCAACAAACACATCATCTCTTAGCTTTACACAAACAATTCAGTGTGAAACAAGTCAAAATTCTTCCCTTTCACTTCTACAATTTCCTGACAGATTCCCAATATCACATATTGCTCATATTGACGAGGAAAAGGAATTTCTGATTAAGGGAACCATCAAGAAACTACAAACAGGAAATGGTTGGACTTATGATGGTTGTGACATCTGCACCAGTAAACCAATGGAGCAAAACAATAAACAATTTTGCAATATCTATTTCGAATCCACTACACCATCTCTGATGCCTCTGGATATATATCAGTTGTCTTCTTTGATAGACATGCTGTGGAACTACTCTACAACCGCTACTGTTCTAAAAAATGAATTGATAGAGGTTGATCTCATACACATTACAATCTTTGTCCTTTAA 1158 0.3817 MATEDYELVKTIDDTKEASSLIVRVIRKWCQLYKSPPHHLACIMFVFIDEEGNKIHAEVTNKQLHEQYKREPSEGDIIYIENFTISPNTWPYRPTSHPWRLQFHPNTYIRPHDAELPRNSFNFVCFTKLHEDMKKKELNTEVLIDVIGFLKSFGDLIDSRTDNAAQNRLSYTLADEEDVTVNCLLWGETATQTYWAKQDDMDPPIIVLMQFARISVKNGILQLSNSYTATRITFNPDIPEAKDLLERLQQSTNTSSLSFTQTIQCETSQNSSLSLLQFPDRFPISHIAHIDEEKEFLIKGTIKKLQTGNGWTYDGCDICTSKPMEQNNKQFCNIYFESTTPSLMPLDIYQLSSLIDMLWNYSTTATVLKNELIEVDLIHITIFVL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0433 385 CDD RPA1_DBD_B_like 145 248 - -
Prci11g0433 385 PANTHER OS03G0429900 PROTEIN 15 332 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Prci11g0433 385 CDD RPA1_DBD_A_like 20 107 - -
Prci11g0433 385 Gene3D - 6 111 IPR012340 -
Prci11g0433 385 Gene3D - 115 260 IPR012340 -
Prci11g0433 385 SUPERFAMILY Nucleic acid-binding proteins 136 250 IPR012340 -
Prci11g0433 385 Pfam Domain of unknown function DUF223 46 137 IPR003871 -
Prci11g0433 385 SUPERFAMILY Nucleic acid-binding proteins 19 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0433 Prci-Chr11 4691927 4693845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0433 23 325 Core DNA Replication Machinery Family AT5G08020 26.498 3.83e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0433 - - pcin:129285670 791.186