Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0432 ATGTCAACAGCTTCAGCTTCTAAAGTCCAGGGAGACTATTCTCCCAAGTATGATCTACGAAAAATATGTAGTGATTTTGTTGGATGGGGATGGTCAGAAGACTATAGATCTGCGAAAAGTGAGTTTGCCTGCAGACACATGCAAAAAGCTGGTTTTTTCATCCAGTGTCATCCAGAAAATTGCAATGCGTATAGTTCAAGAATGTGGTGGGATTTTTTGGCCACTGTCCTTGTGGCAAAGTCGTTGAAGAACGAGGAAGATGTCAAGCTTTGGAAACTTGCACTCCACAAGTTGCGTTTCCTTAACCCTGGTATATGCATTCAGGGGTTAACAGATGATCAAGAAGCTGTGCATAAGTTGAGAGAGCTTGTAGAACGCTTTATCTTACTAAACAATCAATTAAATGATAAGTATGTCAAGTTGCCAGAAGACATACATGCTATTTTGCATTCACTGAATACCATGACCCCTTGGTTCATGAAAAAATCTGGGTTGGGATTGACTGAGCCGCCAAATGATGAGCTCTGGCATAGTGTTGTACATATGGAACTTGCAAACAATAAACTGTCTGAGCTGCCTTTGTCACCAAACTGCCCTGAACTCAAAGTTTTATTGCTTCAGGGAAATGCTGATCTAACAAGAATTCCAAATATGTTTTTCTTTAAGATGCCCTTACTTTGTATCTTGGACTTATCTTACACTAGCGTACGAGAACTACCAGATTCTCTGTTTGAGTTGGAGCAGCTCATTGCACTATATATGAAAGGTTGTAAATGCTTCATGAAATTATCGCCAAAGATTGGGAAATTGAAGAAACTTGAAAAGCTTGATCTTGATGGAACTCAAATCACCCATATGCCAAAAGAGATGCAAGAGTTGACGAATCTTCAAAGCTTGTTCATTTGCTTCTATGAATATCGTGGCAAGAAAAACAAGCGATATACACAGTCAACAATTATTCCATCCGAGGTAATCTCAAAACTTAAGGGGCTGAACCATTTAAGTATTGATGTAAACCCTGATGATGAGCAGTGGTATGAGAATGTACGAGACATTCTTCCAGAAATATTGGGATTAGGGCATTTGCTGACTCTTAGCTTATATATCCCACATCTAGAACTTTTGAAGTTCATACCTGACAGTGTCTTTGAGGTTGATTTTAGATTTATTGTTGGTAGGCATATGCAAAGGATCATATCAAGCACACCATCCACATGTGAGGCAAAATTTAAAGAGAGTGGTTGTAGCTTGAAGTTTGTGAATGGTGATGGCGTTCCTTATGAAATTAAAAGGCTAGTTGGGCACAGCAAGGCCTTATTTCTGGACAGACATAAGACAATCCAGAATCTATCGGAATTTAAAATGATGAATTTAGAACAGTTGCGTGTATTTATTTTGGCAGAATGCAGAGAAATGCAAACAGTTGTTGATGCAAGACAATCAAATAGTGGTGATGATACTTTCTCACACTTGCTATATTTACACGTGTCGCACATGAGGAGTTTAAGAAGCATATGGGAAGGGCCGACGCCACCTCGCAGCTTTTTTGGTCTAAACTTGGAAAAAATGGCAATTTATGATTGCCCAAAGCTCCAAAGCCTTTCTAAGAAGGAACTGTCAAGCCAAAATCTGAAGCTCATTAAAGGAGAAACCAAGTGGTGTGACACACTGCAATGGAGCAAAGAAGAATGGGGAATATCATGCCGGCCATCCAAGTTTGATTGCATCTTTTCATTAATTGATAATCAGATTGACATAATGACTCAATTCGGTATAGATGATGATATTGATGATGGTGCAGATAAGAGGCCATTACTCCCTTTATTTGAGCATCCGAAGCAAAATGCTGACAGAATCAGCGGAATTACTTTTTCAATGTCTAAAAGAATATCTGAAGGTGAAGAAACTTTAGATGATGGGTACAAATGGAGAACATGTGGCCGAAAAGAAATTCTTGGGTCCAAAAATGAAAGCGATTTCAACTGTGACAAAGGAGGTTGCTCTGCTGAAAAGCGACTCCAGAAATCTGAAGAAGACCCAACCCTTGTTGAAATCACTTACAAGGGATGTCACACTTGCACACAGGCTTCTAGTGTAACAAATTCGTCGATGAAAAATCAGGTTGACATTATGACTCAATATGGGATTGATGATGATGATATTGACAATGGTCCAGTTATCATGAGACTAGGGGATTCTACTTCAAATCATGTAACAATGGCGAGAGATAAGACACCATTACAACCTTTATTTGAGCACCCAAAGCAAAATACCGACAGACTCAGCAGAATGACTTTTCAAGTGTCAAAAAGAATATCTGAAGGTGAAAATACTTTGGATGAATGGTACAATTCAGGAGGTGATGGACGAAAGATGAGAGACCTATGCAGTCAGAGAGGGTCATCATCATCAATGGAACCTTCATGTCAGGTGGACAGTTGTGAGACTGATCTCAGTGAGGCTAAGGGCTACCATCGCCGCCACAAGGTCTGTGAGTTCCATACCAAGGCTAGTTCTGTGCTAATTTCAGGCTTGCAACACAGGTTTTGCCAACAATGTAGCAGGTTTCACGAGCTGGCAGAATTTGATGACGCTAGGAGGAGCTGTAGAAGGCGTTTGGCTGCACACAACACCAGAAGATTGATACCAAGCCAATGGACAAAGAAGCCTGAGTCTTTTGATGAATATTGTTGGGACATTCCTGGAGCCAAATTTCCAAGAGAATATTTAAGATGTACTCCCAGAAAATATCAGGATTATCTACCTACCATACAACTGCAGAGAGATGGTGAGGAGCCTTCCCTTAACAGTATCGCCCATCGTGGTCACCACACTTGCACACAAGGCTCCTGTTTAACAGATTCATCCAAGAATAATCAGGTTGAGTTAATGACTCAATTTGGGGTAGATGATGATGATACTTGCTATCATCCAGCGTTGCAGCCTTCTAGTATGAGGATCGTCGAGGAGTAA 2973 0.404 MSTASASKVQGDYSPKYDLRKICSDFVGWGWSEDYRSAKSEFACRHMQKAGFFIQCHPENCNAYSSRMWWDFLATVLVAKSLKNEEDVKLWKLALHKLRFLNPGICIQGLTDDQEAVHKLRELVERFILLNNQLNDKYVKLPEDIHAILHSLNTMTPWFMKKSGLGLTEPPNDELWHSVVHMELANNKLSELPLSPNCPELKVLLLQGNADLTRIPNMFFFKMPLLCILDLSYTSVRELPDSLFELEQLIALYMKGCKCFMKLSPKIGKLKKLEKLDLDGTQITHMPKEMQELTNLQSLFICFYEYRGKKNKRYTQSTIIPSEVISKLKGLNHLSIDVNPDDEQWYENVRDILPEILGLGHLLTLSLYIPHLELLKFIPDSVFEVDFRFIVGRHMQRIISSTPSTCEAKFKESGCSLKFVNGDGVPYEIKRLVGHSKALFLDRHKTIQNLSEFKMMNLEQLRVFILAECREMQTVVDARQSNSGDDTFSHLLYLHVSHMRSLRSIWEGPTPPRSFFGLNLEKMAIYDCPKLQSLSKKELSSQNLKLIKGETKWCDTLQWSKEEWGISCRPSKFDCIFSLIDNQIDIMTQFGIDDDIDDGADKRPLLPLFEHPKQNADRISGITFSMSKRISEGEETLDDGYKWRTCGRKEILGSKNESDFNCDKGGCSAEKRLQKSEEDPTLVEITYKGCHTCTQASSVTNSSMKNQVDIMTQYGIDDDDIDNGPVIMRLGDSTSNHVTMARDKTPLQPLFEHPKQNTDRLSRMTFQVSKRISEGENTLDEWYNSGGDGRKMRDLCSQRGSSSSMEPSCQVDSCETDLSEAKGYHRRHKVCEFHTKASSVLISGLQHRFCQQCSRFHELAEFDDARRSCRRRLAAHNTRRLIPSQWTKKPESFDEYCWDIPGAKFPREYLRCTPRKYQDYLPTIQLQRDGEEPSLNSIAHRGHHTCTQGSCLTDSSKNNQVELMTQFGVDDDDTCYHPALQPSSMRIVEE 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0432 990 Gene3D WRKY domain 623 696 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0432 990 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 775 881 IPR044817 GO:0003677
Prci11g0432 990 Gene3D - 800 870 IPR036893 GO:0003677|GO:0005634
Prci11g0432 990 SUPERFAMILY L domain-like 149 538 - -
Prci11g0432 990 Pfam Leucine rich repeat 199 257 IPR001611 GO:0005515
Prci11g0432 990 Gene3D Ribonuclease Inhibitor 159 315 IPR032675 -
Prci11g0432 990 ProSiteProfiles WRKY domain profile. 632 691 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0432 990 Gene3D Ribonuclease Inhibitor 316 558 IPR032675 -
Prci11g0432 990 Pfam SBP domain 809 880 IPR004333 GO:0003677
Prci11g0432 990 ProSiteProfiles Zinc finger SBP-type profile. 806 883 IPR004333 GO:0003677
Prci11g0432 990 SMART LRR_typ_2 270 293 IPR003591 -
Prci11g0432 990 SMART LRR_typ_2 223 246 IPR003591 -
Prci11g0432 990 SMART WRKY_cls 892 948 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0432 990 SMART WRKY_cls 637 695 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0432 990 SUPERFAMILY WRKY DNA-binding domain 635 695 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0432 990 SUPERFAMILY SBT domain 807 883 IPR036893 GO:0003677|GO:0005634
Prci11g0432 990 FunFam Squamosa promoter-binding-like protein 14 800 870 - -
Prci11g0432 990 Pfam WRKY DNA -binding domain 638 693 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0432 Prci-Chr11 4679592 4685756 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0432 799 880 SBP-box Gene Family AT1G53160 66.667 7.54e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci11g0432 SBP 6.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0432 - - pcin:129285669 1998.02