Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0428 ATGACACTTCTCCATCTTCCTGCATTGATCAGTATTTCCAATGGATTATGCATGGGTCCAAGTTTAGAAAAGATTGGAATTTATGATTGCCCGAAGCTTCATAGCCTTCCAAAAATGTTACTGTCAGTTCAAAATTTGAAAGTCATTAAGGGAGCAACCAAGTGGTGGGAGGCATTGGCATGGAACAAAGAAGAATGGGGAATAAAGGGTCGGCCATATATGTTCGATTCCATCTTTTCTCCAATTGATGAACAGGCTGACATTATGAGCCAATTGGACACGGATGGTGATCAGACCGTGAAAACATGGAAAAAGGTATCTCCATCTTTTGAAGATGGACATAGTTGGAGGAAATATGACCAGAGAGTCAATATCAATTCCCTATTTCCAAGAGAATATTTCAGATGCACACATAAATACCGTCAAGGTTGTCAAGCTATCAAACAGGTGCAGGGAATTGATGAGAAGCCTTACCTTTACAGTATCACCTATATTGGTGGTCATACTTGCACACAAGCCTCCAATGTAACAGATTCCTCCATGATTAATCAGGCTGACTTAACGAATCAATTTGGAGATGATATCGATGACAATCCAGAGTTCCCAAATTCATGGAAATCATCAATTCAAAGTGGTGGCTTGGTCCCTCCACATGGAGCCTGTTGTTTTCAGCCTTATGACGTCAATCGATGCCCGGAAGTAGGCCCAACGGGCCTCGTGATTATCGAGCCGTGA 735 0.4204 MTLLHLPALISISNGLCMGPSLEKIGIYDCPKLHSLPKMLLSVQNLKVIKGATKWWEALAWNKEEWGIKGRPYMFDSIFSPIDEQADIMSQLDTDGDQTVKTWKKVSPSFEDGHSWRKYDQRVNINSLFPREYFRCTHKYRQGCQAIKQVQGIDEKPYLYSITYIGGHTCTQASNVTDSSMINQADLTNQFGDDIDDNPEFPNSWKSSIQSGGLVPPHGACCFQPYDVNRCPEVGPTGLVIIEP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0428 244 Gene3D WRKY domain 94 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0428 244 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 101 180 IPR044810 GO:0003700
Prci11g0428 244 SUPERFAMILY WRKY DNA-binding domain 109 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0428 244 SMART WRKY_cls 110 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0428 244 ProSiteProfiles WRKY domain profile. 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0428 244 Pfam WRKY DNA -binding domain 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0428 Prci-Chr11 4636893 4639279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0428 110 186 WRKY Transcription Factor Family AT3G56400 51.948 3.79e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g0428 WRKY 2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0428 - - pcin:129286639 521.161