Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0426 ATGTCTATCAAGGATCTCTCAATGTTTGGCGGGATGAATATAGAGCAATTGCAAGTTTGTATATTGGTTGAATGCAAAGAGATGCGAGCGATTGTTGATGTAAGACACTCAAGTGTATTTGAGGATATATTTCCCCGTTTGTTGATGTTGAGTGTATCATACATGAAGAATCTGAGGAGCATTTGTGAAGGACGAGTTCATTCCAAGCACTGCTTTGGTATGTTGAAGACCTTAGAATTGCACAATTGTCCAAAGTTAACAACTATTTTCACCTTGGATTTTCTAGGCAACCTTTCACTGTTGAAGGTTCTTCTAGTCAAAGATTGTCCAAAAATAAGTGCTTTAATATCTTGCGGATCATTCGAACTGAGAGTTGGTACTTTCCTCCCTAAATTAAGAACAATGACACTTCTCCATCTTCCTGAACTGATCAGCATTTCCAGTAGATTGCACATAGGTCCAAGTTTGGAAAACATGGGAGTTTATGATTGCCCAAAACTTCAGACTCTTTCAAAAAAGGAATTGTCAAGTCACCATTTGAAAGTCATCAAAGGAGAAACCAAGTGGTGGGAGGCATTAACATGGAGTGAAGCAGAATGGGGAGTCGTTGGCCGGCCGTCTATTTTTGATTGCATCTTTTCTCCAATAGATAAACAGGTTGACATTATGAGTCAATTGGAGTTAGATGATAATATTGATGACATTCCAGTGGACCAGCCATTGCAGTCTTCCACTGGCAAGATCTCTGAGGACATGGGCTGTATCAAAACAGGTGGGATAGTGTGTGAGCCACTACAGTCTTCTAGGGTCAAGGCCTTCAAGTATAGGAAGAGGACCATGGAAATAAGGACAATAATATCTGAGACTTTTGAAGATGGGACTAGCTGGAGAAAATATGGCCAGAAAGAAATTCTTAATGCCAAATTTCCAAGGTGCAACCTATTTCAATTCTCCATGAATCATACAAATGTAGTCTACTTCACATCTATATATGACTTATTTTTGGTAAACTATATGGAAGCCTCTCTTGATTTATGCTACATGTGGAGCATACGCAGGAAGTATTTCAGATGCACTCACAAATTTGATGAGGGTTGTCAAGCTACCAAACAAGTGCAGAAAATTGACCAGAATACTTCCCTTTACCGTATCACTTATTTTGGCAATCACACTTGCACACAAGCCTCCAGCGTAACAGTTTCCTCGATGAATAATCAGGTTGATGTCATGACTCAATTCGGGGTAGATGATATTGACGACACTCCGGTGGATGAGCCATTACGACCTTCCAATGCCGAGGTCATCAAGGACAAAAAGCATTCTCCGACGAGAAGAGCCATGCCTAGATGGACATTGAAATCTAAGGATCTTGCCGATGGATACAGTTGGAGGAAATATGGCCAGAAAGACGTGCTTGGAGCCAAATTTCCAAGAGGATATTACAGATGCTCTCGCAGAAATACGGAGGGTTGCCTAGCTACCAAAGTGTTGGAGAGAGATGACGAGGATCCTTCCCTTTTCAATATCACCTATCGTGGCCGTCACACTTGCAGACAAGCTTCTAGTGCAACAAATTCCTCCTTCAATAATCAGGCTGACTTAATGACTCAAACTGAGGTCGCTGATGATGATGATGATAATATTTACTATCATCCAGCGTTACGGCCTTCTAGCGGAAGGATATTTGCGGACCAAAAGCCAGTTACTGACATAAGCAGCGGGGAAAGTGACGCTCGCACACTAGCTTCCTGTGTAACAAATTCTACTCCCAGTTTCAGTGGAAATCAGTGGGGCAAGTCAGCCTCCGATTCAGATCTAGAGGCATTTCCTTTAATGGGCTTCTGGAATCTAGACTCAAGTCTTGACACAGAACAACTATCCGGTGTTGTGGAATTTGATGAAAACGTCTTTATCGACTTCACCAAGGGTTGA 1932 0.4177 MSIKDLSMFGGMNIEQLQVCILVECKEMRAIVDVRHSSVFEDIFPRLLMLSVSYMKNLRSICEGRVHSKHCFGMLKTLELHNCPKLTTIFTLDFLGNLSLLKVLLVKDCPKISALISCGSFELRVGTFLPKLRTMTLLHLPELISISSRLHIGPSLENMGVYDCPKLQTLSKKELSSHHLKVIKGETKWWEALTWSEAEWGVVGRPSIFDCIFSPIDKQVDIMSQLELDDNIDDIPVDQPLQSSTGKISEDMGCIKTGGIVCEPLQSSRVKAFKYRKRTMEIRTIISETFEDGTSWRKYGQKEILNAKFPRCNLFQFSMNHTNVVYFTSIYDLFLVNYMEASLDLCYMWSIRRKYFRCTHKFDEGCQATKQVQKIDQNTSLYRITYFGNHTCTQASSVTVSSMNNQVDVMTQFGVDDIDDTPVDEPLRPSNAEVIKDKKHSPTRRAMPRWTLKSKDLADGYSWRKYGQKDVLGAKFPRGYYRCSRRNTEGCLATKVLERDDEDPSLFNITYRGRHTCRQASSATNSSFNNQADLMTQTEVADDDDDNIYYHPALRPSSGRIFADQKPVTDISSGESDARTLASCVTNSTPSFSGNQWGKSASDSDLEAFPLMGFWNLDSSLDTEQLSGVVEFDENVFIDFTKG 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0426 643 SMART WRKY_cls 457 519 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 SMART WRKY_cls 290 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 SUPERFAMILY RNI-like 45 168 - -
Prci11g0426 643 Gene3D WRKY domain 278 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 ProSiteProfiles WRKY domain profile. 285 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 Pfam WRKY DNA -binding domain 352 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 Pfam WRKY DNA -binding domain 459 518 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 Pfam WRKY DNA -binding domain 291 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 Gene3D WRKY domain 445 520 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 Gene3D Ribonuclease Inhibitor 13 188 IPR032675 -
Prci11g0426 643 SUPERFAMILY WRKY DNA-binding domain 452 519 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 SUPERFAMILY WRKY DNA-binding domain 288 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 266 399 IPR044810 GO:0003700
Prci11g0426 643 ProSiteProfiles WRKY domain profile. 457 515 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0426 643 SUPERFAMILY WRKY DNA-binding domain 351 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0426 Prci-Chr11 4625064 4627792 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0426 397 522 WRKY Transcription Factor Family AT5G24110 44.444 1.18e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g0426 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0426 - - pcin:129285665 1305.43