Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0423 ATGAGTCAACTGGAGTTGGATGATGATATTGATGACAGTCCAGCGGACCAGCCATTGCAGTCTTCCATTGGCAAGATCCCTGAGGACACGAGTCGTCGTATCACAACGACAGGCGGGGTAGTGTGTGAGCCATTACAGCCTTCTAGTGTCAAGGTCTCCAAGTACGGGAAGAGAAAGACCAAGGAAAAAACGACAATAATATCCGAGTCTCTTGACGATTTATACTTTTGGAAAAAATATGGTCAGAAATTAGTTCGTAATTCCAAATTTCCAAGAAAGTATTTCAGGTGCACTCATAGATGTGATGAGGGTTGTCAAGCTACCAAACAAGTACAGAGAATTGACGAGAAGCCTCACCTTTACAGTATCACTTATTCTGGGAAACACACTTGCACACAAGCCTCCGGTGTAAACAATTCCTCCATGAATAATCAGGTTGACGTGATCGCTCAACTTGGGGTAGATGATATTGACGACAGTCCCGTGGATGAGCCATTACGACCATCCAATGACGAGGTCTTCAAGGACAAAATGCATTATTAG 543 0.4383 MSQLELDDDIDDSPADQPLQSSIGKIPEDTSRRITTTGGVVCEPLQPSSVKVSKYGKRKTKEKTTIISESLDDLYFWKKYGQKLVRNSKFPRKYFRCTHRCDEGCQATKQVQRIDEKPHLYSITYSGKHTCTQASGVNNSSMNNQVDVIAQLGVDDIDDSPVDEPLRPSNDEVFKDKMHY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0423 180 MobiDBLite consensus disorder prediction 160 180 - -
Prci11g0423 180 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 51 142 IPR044810 GO:0003700
Prci11g0423 180 Gene3D WRKY domain 56 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0423 180 SMART WRKY_cls 71 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0423 180 Pfam WRKY DNA -binding domain 72 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0423 180 MobiDBLite consensus disorder prediction 1 32 - -
Prci11g0423 180 MobiDBLite consensus disorder prediction 15 32 - -
Prci11g0423 180 SUPERFAMILY WRKY DNA-binding domain 69 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0423 180 ProSiteProfiles WRKY domain profile. 71 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0423 180 MobiDBLite consensus disorder prediction 159 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0423 Prci-Chr11 4601762 4606514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0423 45 131 WRKY Transcription Factor Family AT3G56400 51.724 2.75e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g0423 WRKY 7.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0423 - - pcin:129284935 355.525