Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0416 ATGGAGGGTGGTCTGTCATCCTACACCGAGTCACTTGGCTTTCCCCCATTGTTCAGAAAGCAGAGGATTTTGAAGTTAGACAGAATAAGAGATTTTGTCAGCTTGTGGCTGAGTTACCCTATGAGATCAGTGCATGATAGCAAACTTCAGACTTGGATTCATCGACTTTCAAATGCTAATGGTTCAGTAGAAGAAAAGTATAGTCTAATCCGGGAGGACCCGCTTCATTATTTGGAAGGACTTGCACCAATCGAAATGATCATGGATAATGAGATAGAAGCTGGAACGATACCAGATGCTATGCTCAGTTTAGCCATTGATCTTGCTGTTGATCAACTAGTTCAAACCTTACTTTCTGGGGATGAACATGTACGCAACATTCACCATGTCATGATCTCTACCAGAAATAATGCTGAACAAAGAGAAATATTCCAAAAAATGAAAGCAGTTTTCAATGATATGGAGAATATGCATCGTTTTAATGAAATCTTTCATAGAGTCTTGTGGGTTGATGCGTCGATGTATCCAAGCCAAGTTAAAGTAGAGGTACTCGTTGAACAACAAATTCGTCTGCAGCTTCAGCTTCAGAAGTTTAGCCTGGGTAATCTCCAAAAGATGATCAACAAGAAATGTTTAGTGCTTCTGTTGGATCATGCTGAGAAAACTTTAGATCTGAGGAAAGTGAACTTGCCTGCATGTTTAAATGAGGCAGTGACGGTGTTCGTTACCATTGAAACTCAAAAGCAAGCAAATGATGAAAAGACAATGGCAATGAATTTAACAATCAATACAGAAGATCATTTGTTGCCATGGAAAGTATTTTGTCAGAATGTAGACAATATAATTGTTTTTAGATCTAGTGCCATCCAAAAAATTGCTGTGCGTATAGTTCAAGAATGTGGTGGCCATCTTTTGGCTATTGTCCTTGTGGCAAAGTCATTGAAGAATGTGACAAATGTCAAACTCTGGGAGCTTGCACTATACAAATTGCGCTGCCTCGAACCATTTTACAATTTGAATATGTTTCAGGGTGTAAGCAAAGTTATGGTTACTGCATTCATAAATTTCATCTGGAATGATATGAATCGAACACTAAAAAATTGCCTCATGAGCTGCTTATTCATTCCTGATATCAGAACCGGGAAGTTTCCAAATGAATTGTTGGATCATTGGATTTCTTATCGGTTGGCGGATGGCTGCAAAGCTATGGATAACTTGAGAGAGCTTGTAGATCGCTCTATCTTACTTCAATCAAATGATAAGCATGTTCAGTTACCGGAAGACAGTCATGCTATTTTGCATGCATTGAACAACCTAACCCCCATGTTTGTGAAAAAATGTGGGTTAGGGTTGACTGAGCCACCAAAGGATGAGCTCTGGCATAATGTTGTACACATGGAACTTGCAAACAATAAACTATTTGAGCTACCTTCGTCTCCAAGCAGCCCTGAACTCAAAGTTTTAATGTTGCAGGAAAATGCTGATTTAACGAGAGTCCCAGATATGTTTTTCTTTAAAATGCCCTTGCTTTGGATCTTGGACTTATCTTACACTAATGTAAGAGAACTACCAGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAACTATATTTGAAAGGTTGTGAATGCTTCATGAAATTATCATCAAAGATTGGAAAATTGAAGAAACTTGAGAAGCTTGATCTTGATGGAACTCAAATCATACATCTGCCAAAAGAGATACAAAAGTTGATCAATCTCCAAAGCTTGTTCCTCTGTTTCTATGAATATCGTGGCAAGAAAAGCAAGCAATATACATGCTCAACAATCATTCCGTCCAAGGTAATCTCAAAACTCAAGGGTTTAAATTTAAGTATTGATGTGAACCCTGACGATGAGCGATGGTACGAAAATGTACAAGACATTCTTCCAGAGATATTGGGACTAAAGCATTTGTTGACCCTGAGATTATATATCCCACATTTGGAACTTTTGAAGTTCGTGCCAGACCATATATTTGAGGTTGATTTTAGATTTATTGTTGGTAGGCACATGCAAAGGATCATATCATGCACACCATCCACGTGTGAAGCAAAATTTAAGCGAAGTGGTTGTAGCTTGAAGTTTGTAAATGGTGATGATACACCCAATGGAATTAAGAAGCTTGTTAGACACAGTAAGGCCTTATTCCTGGAGCGACATAAGACGATCAGGAATCTCTCTGAATTTAAACTGATGAATTTAGAGCAGCTGCGTATTTGTATGTTGGCAGAATGTAGAGAAATGCAAACCATTGTTGATGGAAGACAATCAGATAGTGCTAACGATGTTTTCTCACATTTGTTGTACTTATATATATCGCACATGAAGAGTTTAAGAAGCATATGGGAAGGGCCAATGCCACCTCACTGCTTTTTGGGTATGCTGAAGTCTTTAGTACTGCAAAATTGCCCCGAGTTAACAACTGTCTTTACCCTGGATTTTTTAGGCAATCTTTCACTATTAAAGGAGCTGATTGTTAAGGATTGTTCTAAAGTAAAAACCTTGATAAGTGACAGATCATTCAAACATAAAGGAGAGATTTTCCTCCCAAAATTGAGAAAGATAATGCTTCTACATCTTCCCGAGTTGATCAACATTTCCAATGAATGTCAAATAGGTTCAAGCTTGAAAAGTATAGCAATTTATAATTGCCCGAAGCTCCAAAGCCTTTCTAAGATGGAACTGTCAAGCCAAAATCTAACGGTCATTATGGGAGAAACCAGATGGTGGGATGCAGTCCAATGGAGCAAAGAAGAATGGGGAACAGCCTGTCGGCCATCTATGTTTGATTGCATCTTTTCCTCAATTGATAATCATGTAGAAATAATGACTCAATTTGGGATAGATGAAGATGATATTGACGATGATCCAGATATGACGCCATTACAGACTCTATTTGATTACCCAAAGCAAAACACTGAAAGAATCAGCAGAATGATCTTTTCAGCGTCAAAGAAAATATCTAAAGGTGAAGATACTTTAGACGACAGGTACAAGTGGAGGGAATATGGCCAGAAAACAGAGGACAGACTAAATCCAAGGAGCTATTTCAAATGTGTTGAAGGAGGTTGCTTTGCTAAAAAGCGAGTGCAGAGATCTGAAGAAGACCCAACCATTGTCGAAATCACATACAAGGGATGTCACACTTGCACAGAGGCCTCCAGTGTAACAGATTCATCCATGAATAATCAGGTTTACTTAACCACTCAATGTGGGGTAGATGATGATGATATTGACAATGATCTAGAAGGCATTAGCAGTAGTAAGGAGAGGAAGGGCGTTAAACAAAGAATTCGATTCAGAACAAAGTCAGAGGTAGAAATGTCGGACGATGGGTACAGGTGGAGAAAGTATGGCAAGAAGACCGTGAAGAACAGCCCCTACCCCAGGAACTACTACAAGTGTTCGGTGAATGGATGCCTAGTGAGAAAGAGAGTTGAGAGAGATAGGGATGATTCAAGTTATGTTATAACAACCTATGAAGGCATCCACAACCACCCAAGTTATTGTCACACGGGCACCCAGGCCTCCAGCGTAACGGAGTCCTCCAAGAACAATTAG 3582 0.3922 MEGGLSSYTESLGFPPLFRKQRILKLDRIRDFVSLWLSYPMRSVHDSKLQTWIHRLSNANGSVEEKYSLIREDPLHYLEGLAPIEMIMDNEIEAGTIPDAMLSLAIDLAVDQLVQTLLSGDEHVRNIHHVMISTRNNAEQREIFQKMKAVFNDMENMHRFNEIFHRVLWVDASMYPSQVKVEVLVEQQIRLQLQLQKFSLGNLQKMINKKCLVLLLDHAEKTLDLRKVNLPACLNEAVTVFVTIETQKQANDEKTMAMNLTINTEDHLLPWKVFCQNVDNIIVFRSSAIQKIAVRIVQECGGHLLAIVLVAKSLKNVTNVKLWELALYKLRCLEPFYNLNMFQGVSKVMVTAFINFIWNDMNRTLKNCLMSCLFIPDIRTGKFPNELLDHWISYRLADGCKAMDNLRELVDRSILLQSNDKHVQLPEDSHAILHALNNLTPMFVKKCGLGLTEPPKDELWHNVVHMELANNKLFELPSSPSSPELKVLMLQENADLTRVPDMFFFKMPLLWILDLSYTNVRELPDSLFELEQLRELYLKGCECFMKLSSKIGKLKKLEKLDLDGTQIIHLPKEIQKLINLQSLFLCFYEYRGKKSKQYTCSTIIPSKVISKLKGLNLSIDVNPDDERWYENVQDILPEILGLKHLLTLRLYIPHLELLKFVPDHIFEVDFRFIVGRHMQRIISCTPSTCEAKFKRSGCSLKFVNGDDTPNGIKKLVRHSKALFLERHKTIRNLSEFKLMNLEQLRICMLAECREMQTIVDGRQSDSANDVFSHLLYLYISHMKSLRSIWEGPMPPHCFLGMLKSLVLQNCPELTTVFTLDFLGNLSLLKELIVKDCSKVKTLISDRSFKHKGEIFLPKLRKIMLLHLPELINISNECQIGSSLKSIAIYNCPKLQSLSKMELSSQNLTVIMGETRWWDAVQWSKEEWGTACRPSMFDCIFSSIDNHVEIMTQFGIDEDDIDDDPDMTPLQTLFDYPKQNTERISRMIFSASKKISKGEDTLDDRYKWREYGQKTEDRLNPRSYFKCVEGGCFAKKRVQRSEEDPTIVEITYKGCHTCTEASSVTDSSMNNQVYLTTQCGVDDDDIDNDLEGISSSKERKGVKQRIRFRTKSEVEMSDDGYRWRKYGKKTVKNSPYPRNYYKCSVNGCLVRKRVERDRDDSSYVITTYEGIHNHPSYCHTGTQASSVTESSKNN 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0416 1193 SMART WRKY_cls 1001 1059 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 SMART WRKY_cls 1116 1175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 Pfam Leucine rich repeat 483 541 IPR001611 GO:0005515
Prci11g0416 1193 Gene3D - 269 343 IPR042197 -
Prci11g0416 1193 FunFam WRKY transcription factor 57 1102 1176 - -
Prci11g0416 1193 Gene3D Ribonuclease Inhibitor 370 668 IPR032675 -
Prci11g0416 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 372 IPR027417 -
Prci11g0416 1193 Gene3D WRKY domain 1100 1175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 Gene3D WRKY domain 988 1059 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 974 1057 IPR044810 GO:0003700
Prci11g0416 1193 Pfam WRKY DNA -binding domain 1117 1174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 Pfam WRKY DNA -binding domain 1002 1057 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 SUPERFAMILY WRKY DNA-binding domain 999 1058 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 Gene3D Ribonuclease Inhibitor 696 915 IPR032675 -
Prci11g0416 1193 SUPERFAMILY WRKY DNA-binding domain 1109 1174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 ProSiteProfiles WRKY domain profile. 1111 1176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 SMART LRR_typ_2 554 576 IPR003591 -
Prci11g0416 1193 SMART LRR_typ_2 507 530 IPR003591 -
Prci11g0416 1193 ProSiteProfiles WRKY domain profile. 996 1055 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0416 1193 SUPERFAMILY L domain-like 434 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0416 Prci-Chr11 4589095 4595582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0416 1111 1193 WRKY Transcription Factor Family AT5G07100 40.964 4.49e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g0416 LRR_8 1.5e-09 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0416 - - pcin:129284803 2369.73