Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0406 ATGGGAAGGAAAAAGACAGAGGAAGCTGGTCCTGCGACAAAGGCTAAGAAGGAAAAGTTCTCTGTCTCTGCCATGCTGGCCAGTATGGATGAAAAACCTGATAAGCCCAAAAAAGGTTCTTCTTCATCCAGTAAGCCCAAGGCAAAATCTGCTCCTAAAGTTTCTGCTTACACTGATGGTATTGATCTTCCTCCCTCTGATGAAGAAGAAGATGAAGATATGGAAGAGGAGCAAGAACAAAATAGTGTGCCTAAGCGGTCCACTCAGCAGCAAAGGCCTGACTTAAAGCCTCTTGATGTGGCTATCACTGACAAAGAGTTAAAAAAGAGGGAAAAGAAGGATATTCTTGCTGCCCATGTTGCAGAGCTGGCTAAACAGGAAGCACTTAAGGATGACCGTGATGCTTTTACTGTGGTCATTGGTAGTCGGACTTCAGTGCTTGATGGAGAAAATGATGCCGATGCCAATGTAAAAGATGTGACAATAGAAAACTTTTCTGTGTCAGCTCGGGGTAAAGAACTCCTTAAAAATGCATCAGTGAAGATATCTCATGGGAAGCGGTATGGTTTGGTTGGGCCCAATGGAAAGGGTAAGTCCACACTGTTGAAGCTCCTTGCCTGGAGAAAGATACCGGTGCCAAAGAATATTGATGTTCTTCTGGTTGAACAGGAGGTAGTTGGTGATGATAAAACAGCACTTGAAGCTGTTGTTTCTGCTAATGAAGAACTTGTTAAAACCCGACAACAAGTGGCTCTTCTTCAAAATGCAAATTCTGTTGAAGAAAGTGTAGGCAAGGATGATAGTTATGAAGATGATGCCGGAGAGAAGCTTGCTGAGCTGTATGAAAAGCTACAGCTGATGGGATCTGATGCAGCTGAAGCTCAAGCGTCAAAGATTCTAGCAGGATTAGGTTTTACAAAGGATATGCAGGGCCGTGCTACAAAATCATTTAGTGGGGGTTGGAGGATGAGAATTTCTTTGGCCAGGGCACTTTTTGTTCAGCCAACTCTATTATTGCTTGACGAACCAACAAATCATCTTGATCTAAGAGCTGTTCTCTGGTTGGAAGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTTGTCTCACATGATAGGGATTTCCTAAATACAGTTTGCAATGAGATTATTCATCTGCATGATTTGAAGCTTCATGTCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTACGAGCAGCGTCGCAAAGAGATGAATAAGAAGTTTGAGATTTATGACAAGCAGATGAAAGCAGCCAAAAGGAGTGGAAATAGAGTTCAGCAGGAAAAAGTGAAGGATCGAGCTAAGTTTGCAGCTGCCAAGGAGGCAGCAAAAAGCAAGGGCAAAGGCAAGGGCAAGGTTGATGAGGATGAAGTGCCAGCAGATGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTTCACTTCCCTGAACCCACTGAACTAACACCTCCTCTTCTGCAACTTATTGAAGTGAGCTTCAGCTATCCAAATCGAAAGGATTTCAGACTCTCAAATGTTGATGTTGGTATAGATATGGGGACTCGTGTGGCCATTGTTGGCCCTAACGGAGCTGGGAAATCGACTCTGCTGAATCTTCTTGCCGGTGACTTGTCTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATCGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACAATGGACGAAACACCCGTTCAGTATCTTCTCCGTCTCCATCCAGATCAAGAAGGACTCAGCAAGCAGGAGGCCGTTCGAGCAAAACTTGGTAAGTTTGGATTACCTAGCCATAATCACCTTACCCCTATTGCCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTGTTCACATCAATATCCATGTCAAATCCCCACATTTTGCTATTGGATGAACCCACTAATCATCTAGATATGCAAAGTATTGATGCTTTAGCCGATGCATTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCACGTGTATGCGAGGATGAAGAGAGGAGTCAAATCTGGGTTGTTGAGGACGGTACAGTCAAAACATTTGATGGATCTTTCGAGGATTACAAGGACGAGTTGCTGAGAGAAATTAAAGCCGAAGTAGATGACTGA 2166 0.4367 MGRKKTEEAGPATKAKKEKFSVSAMLASMDEKPDKPKKGSSSSSKPKAKSAPKVSAYTDGIDLPPSDEEEDEDMEEEQEQNSVPKRSTQQQRPDLKPLDVAITDKELKKREKKDILAAHVAELAKQEALKDDRDAFTVVIGSRTSVLDGENDADANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKTRQQVALLQNANSVEESVGKDDSYEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHVYRGNFDDFESGYEQRRKEMNKKFEIYDKQMKAAKRSGNRVQQEKVKDRAKFAAAKEAAKSKGKGKGKVDEDEVPADVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRKDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSNPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVKTFDGSFEDYKDELLREIKAEVDD 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0406 721 MobiDBLite consensus disorder prediction 63 78 - -
Prci11g0406 721 MobiDBLite consensus disorder prediction 1 15 - -
Prci11g0406 721 SMART AAA_5 184 389 IPR003593 GO:0016887
Prci11g0406 721 SMART AAA_5 520 696 IPR003593 GO:0016887
Prci11g0406 721 CDD ABCF_EF-3 494 696 - -
Prci11g0406 721 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 413 IPR003439 GO:0005524
Prci11g0406 721 Pfam ABC transporter 175 345 IPR003439 GO:0005524
Prci11g0406 721 ProSitePatterns ABC transporters family signature. 317 331 IPR017871 GO:0005524|GO:0016887
Prci11g0406 721 CDD ABCF_EF-3 160 390 - -
Prci11g0406 721 Gene3D - 462 720 IPR027417 -
Prci11g0406 721 Pfam ABC transporter 511 646 IPR003439 GO:0005524
Prci11g0406 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 407 IPR027417 -
Prci11g0406 721 MobiDBLite consensus disorder prediction 448 467 - -
Prci11g0406 721 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 134 714 - -
Prci11g0406 721 Gene3D - 157 443 IPR027417 -
Prci11g0406 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 708 IPR027417 -
Prci11g0406 721 FunFam ABC transporter F family member 4 459 721 - -
Prci11g0406 721 Coils Coil 236 256 - -
Prci11g0406 721 Coils Coil 409 429 - -
Prci11g0406 721 FunFam ABC transporter F family member 4 158 441 - -
Prci11g0406 721 MobiDBLite consensus disorder prediction 1 99 - -
Prci11g0406 721 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 494 719 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0406 Prci-Chr11 4431971 4436891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0406 493 672 Calmodulin-binding Proteins AT2G36910 31.068 3.26e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0406 K06184 - gmx:100806865 1165.98