Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0403 ATGGGCTGCTTATGCTCGAGAGGGACACATTCACATGATTATGTCGCAGAGAACCATGTCCAGAAAACAAAGAAATCCTCCAAAGGAACGGCAAGGAGGGATCAAAAAATTGCAACGCAAGAGGAATGTGGCGAAGGAAACGATGTTAGTACGAGGTTAATATCATCAGATGAGAGGGAGAAGAATGTGGAAACAAAAGGGAAACCTGGGAATTCACAAATTACAAGTGTCGAAGAAGGACAGAGTAGGATGAGGATGTTGAATAGAATAGGTAGTTTGAAAAGAGGAGAGAGAGGAGCCCAAGTTCTTGCTGGCTGGCCTTCATGGCTAACTGCTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCTCGTAGATCAGAATCCTTTGAGAAGTTAGAGAAGATTGGACAAGGGACATATAGCAGCGTTTACAAAGCAAGAGATTTGGAAACAAATAAAATAGTTGCATTGAAGAAGGTTCGATTTACAAATATGGACCCGGAAAGTGTTCGTTTCATGGCCAGAGAAATCATTATACTGCGAAGGCTAGATCATCCAAATGTGATGAAACTTGAAGGCATGATAACCTCTAGGGTTTCTGGCAGCTTATACCTTATTTTTGAATATATGGAACATGATCTCACAGGCCTCGCAGCTTTACCTGGCATCAAGTTTTCAGAAGAACAGATAAAGTGCTACATGCAGCAACTAATTAGGGGGCTAGAGCATTGTCACAAGAAGGGGGTGCTACACAGAGACATAAAAGGATCAAATCTGCTAATAGACAACAAAGGGAATTTGAAAATTGCAGATTTTGGGCTAGCCACTGTGCTGGAAGGCCAAGCATTGACAAGTAGAGTGGTCACCTTGTGGTACAGATCACCTGAACTATTACTTGGATCCACCAATTATGGTGTTGCTGTTGACTTGTGGAGCGCAGGTTGCATTCTTGCTGAACTCTTCGCGGGCAAGCCTATCATGCCCGGTCGAACCGAGGTAGAGCAACTGCATAAGATATTTAAACTGTGTGGATCACCTTCTGAGAGATACTGGAAGAAGTCAAAGCTACCACATGCCACCAGTTTCAAGCCTCAACAACCTTACAAGCGTGTTGTTGCAGAGACATTCAAGGATTTCCCGTCCTCCGCACTCAAACTTCTTGATGTTCTTCTTGCTACAGAACCTGACGATCGAGGAACTGCCTCCTCAGCACTTCAGAGCGAGTTCTTCACGACAAAGCCGCTTCCTTGTGAGCCTTCAAGTTTGCCGAGGTATCCACCAAGTAAGGAGTTTAATGTGAAGCTTCGAGAAGAGGAAGCTAGAAGAAAGAAAGGGGCGACAAGGAAAGGAAATGAACAAGAGCTTGCCAAGAGTTCTGTAAACCATAAAGCTGCCCCACCACCTGATACCAAGTCCCTCCTTTCAGCAGCCACTGAGAATCGAGCAGGACCGAACCCGAAGCGGAGGCTGGAGAAGAACGGGTTGCTGATTGAACCGGCAAGCACAACAAGAGGAGCCAAAGTACTGTGTCATTCGGGGCAATCCACGGTGCAGAGCGCCTACATAAAAGTCATGAAGCATCGTGAAGCCGCAGGAGAACACGAAGTGTTCGTCGGAACCAGGAGGAATCAGAGAGCGTACTGGAACACCGCCAACGCCGCGCGTCTCTCCAAGTTCTCAAACTCCGTCGCCGCTGACGGCGGCTCCCGCCTAGAAGTGATCACCGCCGCCGCAGGTAACTCGTCTGTCTGGGGAGACGACCGCTTCGGCGAGAGGTATAGGCATGCGGCTGCCGGAGAATCCGAACTCTTGCTGCCGGCATCCAACAAGTCTTCTTTAAACAAACCTCGTGTCAAGGATTATGGAGGGAAGGATGGAAATAAGTTGCAATATTCAGGACCGTTGGTGTCTGCAACAGGAAACCTGGAAGAAATGCTGAAGCAGCACGAACAACAAATCCAACATGTCTTACGTAAAGCTGCTGGTTTTGATAATAATAAGGTCAAGACTTCATAA 2016 0.4697 MGCLCSRGTHSHDYVAENHVQKTKKSSKGTARRDQKIATQEECGEGNDVSTRLISSDEREKNVETKGKPGNSQITSVEEGQSRMRMLNRIGSLKRGERGAQVLAGWPSWLTAVAGEAISGWIPRRSESFEKLEKIGQGTYSSVYKARDLETNKIVALKKVRFTNMDPESVRFMAREIIILRRLDHPNVMKLEGMITSRVSGSLYLIFEYMEHDLTGLAALPGIKFSEEQIKCYMQQLIRGLEHCHKKGVLHRDIKGSNLLIDNKGNLKIADFGLATVLEGQALTSRVVTLWYRSPELLLGSTNYGVAVDLWSAGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSERYWKKSKLPHATSFKPQQPYKRVVAETFKDFPSSALKLLDVLLATEPDDRGTASSALQSEFFTTKPLPCEPSSLPRYPPSKEFNVKLREEEARRKKGATRKGNEQELAKSSVNHKAAPPPDTKSLLSAATENRAGPNPKRRLEKNGLLIEPASTTRGAKVLCHSGQSTVQSAYIKVMKHREAAGEHEVFVGTRRNQRAYWNTANAARLSKFSNSVAADGGSRLEVITAAAGNSSVWGDDRFGERYRHAAAGESELLLPASNKSSLNKPRVKDYGGKDGNKLQYSGPLVSATGNLEEMLKQHEQQIQHVLRKAAGFDNNKVKTS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0403 671 FunFam probable serine/threonine-protein kinase At1g54610 116 211 - -
Prci11g0403 671 Gene3D Transferase(Phosphotransferase) domain 1 217 449 - -
Prci11g0403 671 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Prci11g0403 671 Coils Coil 639 666 - -
Prci11g0403 671 Gene3D Phosphorylase Kinase; domain 1 124 216 - -
Prci11g0403 671 CDD STKc_CDK9_like 129 410 - -
Prci11g0403 671 ProSiteProfiles Protein kinase domain profile. 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0403 671 PANTHER CELL DIVISION PROTEIN KINASE 127 416 - -
Prci11g0403 671 Pfam Protein kinase domain 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0403 671 FunFam probable serine/threonine-protein kinase At1g54610 212 450 - -
Prci11g0403 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Prci11g0403 671 SUPERFAMILY Protein kinase-like (PK-like) 124 417 IPR011009 -
Prci11g0403 671 MobiDBLite consensus disorder prediction 19 41 - -
Prci11g0403 671 SMART serkin_6 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0403 671 MobiDBLite consensus disorder prediction 19 79 - -
Prci11g0403 671 MobiDBLite consensus disorder prediction 439 473 - -
Prci11g0403 671 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0403 Prci-Chr11 4410524 4417648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0403 121 485 Core Cell Cycle Gene Families AT5G10270 49.479 7.21e-121 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci11g0403 Pkinase 7.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0403 - - qsa:O6P43_031464 757.673