Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0398 ATGGCGCTGATCCTATATCCTGGGAGAAACACAAACAAAAATGGTTACAAGGCACTTATTGCAGCAGAGTATGTGGGCGTGCAAGTTGAAGTGGCTGAAGATTTTGAGATGGGCGTCTCTAATAAAACTCCTGAATTTATGAAGATGAACCCTATTGGCAAGGTTCCTGTTTTGGAAACCCCAGATGGTCCAATATTTGAGAGCAATGCAATTGCACGCTATGTTGCTCGCTTGAAGGCTGACAGTGCATTATATGGTTGCTCTCCGATTGATTATGCCCACATTGAACAATGGATTGATTTTTCTTCATTGGAGATTGATGCTAATCTTCTCATCTGGATCAGACCAAGAATGGGATATGGTCCATATCTTCCCCCAGTTGAGGAGGCTGCAATTTCTGCATTGAAGAGAGCATTGGGTGCTTTGAACACTCACCTTGCCTCTAATACTTACTTGGTTGGTCATTCTGTGACCCTGGCTGACATCATCATGACATGCAATTTGTTTTTCGGTTTCAATCGTCTCATGACTAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAACCAGCCAAAATTCCAAAAAATTTTAGGTGAGGTCAAGCAGACTGAAGTTGTTCCTTCCATTCAATCTGCAAAGAAGCCTTCCCAGCCCAAAGAATCGGCTAAACCCAAGGGAAAGGATGAACCAAAGAAAGAGACTAAGAAAGAGGCCCAAAAAGAAAAAGAAAAGCCTGCAGAAGAAGCTGAAGAAGAGGCACCAAAGCCCAAACCCAAGAATCCTCTGGACCTTCTTCCTCCGAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACTCTAAAACCAACTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCTGAGGGATATTCTCTCTGGTTCTGTGATTACAAATACAACGATGAGAATACCGTTTCCTTTGTGACCATGAACAAGGTCGGTGGATTTCTTCAGAGGATGGATCTGGCTCGCAAGTATGCGTTTGGGAAAATGCTTGTGATCGGTTCAGAACCACCATTCAAGGTGAAGGGATTATGGCTATTCCGTGGGCAAGAAATCCCTCAATTTGTGCTTGATGAGTGTTATGACATGGAGCTCTACGAATGGACTAAGGTTGACATCTCAGATGAGGCTCAAAAGGAGCGAGTCAATCAGATGATTGAAGATTGTGAGCCTTTTGAGGGACAGGCTCTTCTGGATGCCAAATGCTTCAAGTGA 1278 0.4358 MALILYPGRNTNKNGYKALIAAEYVGVQVEVAEDFEMGVSNKTPEFMKMNPIGKVPVLETPDGPIFESNAIARYVARLKADSALYGCSPIDYAHIEQWIDFSSLEIDANLLIWIRPRMGYGPYLPPVEEAAISALKRALGALNTHLASNTYLVGHSVTLADIIMTCNLFFGFNRLMTKSFTSEFPHVERYFWTLVNQPKFQKILGEVKQTEVVPSIQSAKKPSQPKESAKPKGKDEPKKETKKEAQKEKEKPAEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNSKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVLDECYDMELYEWTKVDISDEAQKERVNQMIEDCEPFEGQALLDAKCFK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0398 425 FunFam Elongation factor 1B gamma 1 75 - -
Prci11g0398 425 SUPERFAMILY GST C-terminal domain-like 74 212 IPR036282 -
Prci11g0398 425 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 265 425 IPR001662 GO:0003746|GO:0006414
Prci11g0398 425 MobiDBLite consensus disorder prediction 214 272 - -
Prci11g0398 425 FunFam Elongation factor 1 gamma 81 217 - -
Prci11g0398 425 MobiDBLite consensus disorder prediction 225 265 - -
Prci11g0398 425 Pfam Glutathione S-transferase, C-terminal domain 130 198 IPR004046 -
Prci11g0398 425 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 425 IPR044628 GO:0004364
Prci11g0398 425 SMART EF1G_2 264 372 IPR001662 GO:0003746|GO:0006414
Prci11g0398 425 SFLD Main (cytGST) 14 191 - -
Prci11g0398 425 SUPERFAMILY eEF1-gamma domain 265 425 IPR036433 GO:0003746|GO:0006414
Prci11g0398 425 CDD GST_N_EF1Bgamma 5 78 - -
Prci11g0398 425 FunFam Elongation factor 1-gamma 1 265 425 - -
Prci11g0398 425 Pfam Elongation factor 1 gamma, conserved domain 264 372 IPR001662 GO:0003746|GO:0006414
Prci11g0398 425 Pfam Glutathione S-transferase, N-terminal domain 2 77 IPR004045 -
Prci11g0398 425 SUPERFAMILY Thioredoxin-like 8 85 IPR036249 -
Prci11g0398 425 Gene3D Glutaredoxin 2 75 - -
Prci11g0398 425 Gene3D - 81 217 - -
Prci11g0398 425 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 265 425 IPR036433 GO:0003746|GO:0006414
Prci11g0398 425 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 223 IPR010987 -
Prci11g0398 425 SFLD Glutathione Transferase (cytosolic) 14 191 IPR040079 -
Prci11g0398 425 CDD GST_C_EF1Bgamma_like 91 213 - -
Prci11g0398 425 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0398 Prci-Chr11 4392088 4395397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0398 1 425 Eukaryotic Initiation Factors Gene Family AT1G57720 74.588 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0398 K03233 - qsa:O6P43_031468 697.197