Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0388 ATGGCCGGAGAGAGTGGCGGTGTTGGTTCTGGGGATGACTCGGGAACATCGTCCCCGAAGAATAAAATTAAGTTCTTATGCAGCCATGGCGGGAAGATTCTTCCTAGACCCGGCGACGGCGTGCTGAAGTATGTGGGCGGCGAGACACGTGTCATTGCAGTGCCTCGTGACAGCACTTTCTCAGACTTTATGAAGAAAGTCACTGCTCTGACGGATGGTGAAATGGTCCTCAAGTACCAACTTGTCCCTGAAGATCTAGATGCCTTGGTCACAGTTAGGTCGGATGCAGATCTCCAGCACATGTTTGATGAGCATGATCGCCATGGAATAGGAGCTCCAATGCTTCGAGCTTTCCTGTTTCCTTCCAAACCACTTGTACTGGAGAACCAGTCATCTTTCACTGAACCGCACCCATCAGAGCAGCGCTACATCGATGCCATCAATGGCATCATCCACATTAACCCCAGGGGAAGACCTTGTTCTATCAGAGTTGTCTCCTCAGCTTGTTCTTCCCCAAAAAAATCAGATTCCCCAGATGGCCATTCTGTAGATGTAACCCCTGAATCATCATTCTTTATCAGCAACCCAAGGTCATCGATGCACAGAGTGCGAAGTTCTCCCAGCTTCAGCAGCCTTACCAACCTCCAAGGCAACCTCCATAGTACTAAGTATGAACGCAGTTGTTATCACCAGCACCACCAGCACCACCCTCATGGCCATCCTTTTGTTAGACTGTCATCAGATCCACAAGCAGTGTTTTGGTTTGGAAGGCCCTCATCAATTTTGTCATTGACGAGGCAAGATAGTGGTAGGGGTAATGGTTTTAACCAGTATTACGCCCCTAACAGAAGCAACAGTAACAAAGGGAATTCAGGCCTCCCCAAAAGTGGAGGAGGACATCTTGATGAATCTTATACACCTGGACATCTTAGGTTTGAGAGATCCAATAGTGCTCCTCGCGCCCCAAGTCCTATATGGGAATAG 984 0.4868 MAGESGGVGSGDDSGTSSPKNKIKFLCSHGGKILPRPGDGVLKYVGGETRVIAVPRDSTFSDFMKKVTALTDGEMVLKYQLVPEDLDALVTVRSDADLQHMFDEHDRHGIGAPMLRAFLFPSKPLVLENQSSFTEPHPSEQRYIDAINGIIHINPRGRPCSIRVVSSACSSPKKSDSPDGHSVDVTPESSFFISNPRSSMHRVRSSPSFSSLTNLQGNLHSTKYERSCYHQHHQHHPHGHPFVRLSSDPQAVFWFGRPSSILSLTRQDSGRGNGFNQYYAPNRSNSNKGNSGLPKSGGGHLDESYTPGHLRFERSNSAPRAPSPIWE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0388 327 MobiDBLite consensus disorder prediction 1 21 - -
Prci11g0388 327 SMART PB1_new 37 122 IPR000270 GO:0005515
Prci11g0388 327 MobiDBLite consensus disorder prediction 265 293 - -
Prci11g0388 327 SUPERFAMILY CAD & PB1 domains 39 126 - -
Prci11g0388 327 PANTHER OS05G0427100 PROTEIN-RELATED 12 258 - -
Prci11g0388 327 Gene3D - 43 121 - -
Prci11g0388 327 Pfam PB1 domain 42 121 IPR000270 GO:0005515
Prci11g0388 327 MobiDBLite consensus disorder prediction 168 190 - -
Prci11g0388 327 CDD PB1_UP2 26 120 - -
Prci11g0388 327 MobiDBLite consensus disorder prediction 265 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0388 Prci-Chr11 4321709 4324298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0388 22 151 MAP Kinase Kinase Kinase AT5G57610 48.175 1.30e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0388 - - pcin:129286930 638.262