Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0378 ATGATCTCCAAATCAAATTCTCAGTCATCCAGCTCAACAATATCAAGAACAAGAAGAAGGACCACCACCACCACCAGGAGCAGCACCGACAAAAACTACATCAAAGCCTCTATCAAGGATCGTATTAGTGAGAATGATGATTTGGGATTATCACTAAGGTTACACACAACGTCAAGTACTCCAAGTGATGCACCTCATCAAGATCCAGACAAAGAACAATTAATAGTGGCTTCTTCTTCTTCGTCGTCACTGCAACAAAACCAGTTCATCATCAATCAGATTCATCATCATCATCATCACTTGCCTGATTCTTCTTCGAATTCTCATCATCCTCATGCTGCGACGTCGTCTACTCCAAATAGAAAGGCTAGGGTTTGTGTTAGAGCAAGATGTGACACAGCCACTATGAATGATGGGTGCCAATGGAGAAAATATGGGCAAAAAATTGCTAAAGGAAATCCATGTCCCCGTGCCTATTATCGATGCACTGTAGCTCCAGGATGCCCTGTAAGGAAGCAGGTACAAAGATGCATAGAGGACATGTCGATCCTGATTACAACGTACGAAGGGACACATAATCATCCTCTGCCTGTAGGTGCAACAGCCATGGCGTCTACTGCTTCAACAGCAGCTTCCTTCATGTTACTTGACTCTTCATCATCATCACAACCTAATTATAGTAACACTTTCGTCTCTTCAAGTAACTTCACAACCCTAAACCCTAATCTTCATCATCATCCTAATTCTAATTCTAAAGGAGGGCTTGTGTTCGATCTCACCAACAACCCTGCTAATGATAAACTGCGTTTTCCTTCCATCAACCGTCACCATTTTCTCGGATGTCAAGCAGATCAGTCTTGA 861 0.4262 MISKSNSQSSSSTISRTRRRTTTTTRSSTDKNYIKASIKDRISENDDLGLSLRLHTTSSTPSDAPHQDPDKEQLIVASSSSSSLQQNQFIINQIHHHHHHLPDSSSNSHHPHAATSSTPNRKARVCVRARCDTATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIEDMSILITTYEGTHNHPLPVGATAMASTASTAASFMLLDSSSSSQPNYSNTFVSSSNFTTLNPNLHHHPNSNSKGGLVFDLTNNPANDKLRFPSINRHHFLGCQADQS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0378 286 MobiDBLite consensus disorder prediction 98 122 - -
Prci11g0378 286 MobiDBLite consensus disorder prediction 1 42 - -
Prci11g0378 286 SMART WRKY_cls 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0378 286 Gene3D WRKY domain 121 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0378 286 MobiDBLite consensus disorder prediction 107 122 - -
Prci11g0378 286 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 49 257 IPR044810 GO:0003700
Prci11g0378 286 Pfam WRKY DNA -binding domain 137 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0378 286 ProSiteProfiles WRKY domain profile. 131 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g0378 286 MobiDBLite consensus disorder prediction 1 32 - -
Prci11g0378 286 SUPERFAMILY WRKY DNA-binding domain 129 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g0378 286 FunFam probable WRKY transcription factor 31 121 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0378 Prci-Chr11 4219951 4223016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0378 54 229 WRKY Transcription Factor Family AT1G68150 62.712 2.53e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g0378 WRKY 8.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0378 - - pcin:129285658 437.958