Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0376 ATGGACGCTGCCAAGCGCAAGCGCCTGAAGCCCAGGCTTGAGCGCCGAAATGCCATGAAGAACATCGATTACCAAGTTCCCGCCTCCTTAGCTTCCTCCTTCGACGATTCCTCGTCCCCAGATTTTCAATCTCCCTCATCCCTCGATCTTTCCCCTTCTCTTCAGAGACAAACCAGCATCCGTGTCCAGGGAATCGACGGCGAGTTCGAATTGATTTTCCGCAGCCTTGGGCTTTCTGGCCCGGACGACTTTGCCATTCCAGTTGATGCCTGGAAAGCCCAAAGGTCTCGCTATAATTTAAGTGCTAAATTACCGGATAAGAAGGTAGAGGATGAGAAATCGGTGAAACTTGAATCTAGGGTTTCGATTAATCGTGGTATTGAAGTGCCTCTTGATGAAGGGCAGCTCGGGAAGAGTGACGTTCCATCTGATTCTAAGCCTCTTGGGGGTGGGGGAATCAAGGGTGCTAGGCCTCCCGTCCTTTCAACGCCCCCAGTAATGCTGCCGCCGGTCGTGGATGACGGGATATCTACTTGGGATTTAGTGAGGTCTTTGTCAGACGGTGTTGTTGATAATGATTCACCGATTCGTGATGAGGGAATCATTTCTTCGGGGGAGGAAGATGAAATGCGCGTCGGAGCAAATGAGGTTGGTGACCGAGGAATTGATGGTGGGGAAGAGTCGCATAGTCGGAGACATGGGGAAAGAAATCTTATTTCGGATTCTTCTTCATCTACGTCCCGTGATGACGAAGAAAGTGATGGCGTTGTTCACAAGGTTTTTGGTGGTGCTGACGAATCGGTTTACAATGTCTCTCCAAATGGTTCATTTAGACGCATTTTCAAATCTTGGCAAAAGGGGGAGATTTTAGGGAAAGGATCATTTGGAACGGTGTATGAAGGCTTCACAGATGATGGATTCTTTTTTGCTGTAAAGGAAGTTTCTTTGCTGGATCAGGGAACCCAAGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATATATCTTTTGAGTCAATTTGAACATGAGAACATTGTTCGATATCTTGGCACAGACAGGAATAAAAATACGCTATACATCTTCCTAGAGCTTGTAACCAAAGGATCATTGGCAAAACTCTATCAAAAGTATCGTCTGAGGGACTCTCAAGTTTCTTCATACACAAGGCAGATTTTAAGTGGGTTAAAGTATCTTCATGATCGCAATGTGGTTCACAGGGACATCAAGTGTGCTAATATACTGGTTGATGCAAATGGGTCAGTAAAGCTTGCTGATTTTGGGCTAGCCAAGGCAACCACTATGAATGATGTTAAATCAAGCAAAGGCTCCCCGTATTGGATGGCCCCTGAGGTTGTAAATCTGAAAAGCCGTGGTTATGGCCTAGCAGCTGATATATGGGGCTTGGGATGCACAGTTTTGGAGATGTTGACACGCCAGCCTCCTTACTCTCATCTGGAAGGAATCAATTTGCCCAAAGGTCAGATCAAGAACTTGTGTGTGTGA 1503 0.4637 MDAAKRKRLKPRLERRNAMKNIDYQVPASLASSFDDSSSPDFQSPSSLDLSPSLQRQTSIRVQGIDGEFELIFRSLGLSGPDDFAIPVDAWKAQRSRYNLSAKLPDKKVEDEKSVKLESRVSINRGIEVPLDEGQLGKSDVPSDSKPLGGGGIKGARPPVLSTPPVMLPPVVDDGISTWDLVRSLSDGVVDNDSPIRDEGIISSGEEDEMRVGANEVGDRGIDGGEESHSRRHGERNLISDSSSSTSRDDEESDGVVHKVFGGADESVYNVSPNGSFRRIFKSWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDQGTQGKQSIFQLQQEIYLLSQFEHENIVRYLGTDRNKNTLYIFLELVTKGSLAKLYQKYRLRDSQVSSYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATTMNDVKSSKGSPYWMAPEVVNLKSRGYGLAADIWGLGCTVLEMLTRQPPYSHLEGINLPKGQIKNLCV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0376 500 MobiDBLite consensus disorder prediction 1 20 - -
Prci11g0376 500 SMART serkin_6 284 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0376 500 Gene3D Transferase(Phosphotransferase) domain 1 282 497 - -
Prci11g0376 500 MobiDBLite consensus disorder prediction 31 55 - -
Prci11g0376 500 FunFam Protein kinase, putative 280 492 - -
Prci11g0376 500 ProSiteProfiles Protein kinase domain profile. 284 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0376 500 SUPERFAMILY Protein kinase-like (PK-like) 280 486 IPR011009 -
Prci11g0376 500 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Prci11g0376 500 Pfam Protein kinase domain 285 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0376 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Prci11g0376 500 MobiDBLite consensus disorder prediction 192 254 - -
Prci11g0376 500 MobiDBLite consensus disorder prediction 133 166 - -
Prci11g0376 500 MobiDBLite consensus disorder prediction 200 238 - -
Prci11g0376 500 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0376 Prci-Chr11 4206934 4212607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0376 12 97 MAP Kinase Kinase Kinase AT4G08500 44.186 5.51e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci11g0376 Pkinase 4.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0376 K13414 - qsa:O6P43_012258 542.732