Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0364 ATGGATATGAGAGGCCGTCCTCGTGTTGTCGTCAATGGCGTTCAAAGAACCAGAACCTTCCACTACTTCTGGTGCCAAACATGCCAGCGCGCCGTCAGAATCCCCTCCTCTGCAAACCCTAATTTCTCTTCCTGCCCCTTTTGCTCCCATCAATTACACCTCGAACTCGATATCACCAGGCCCAGCCTTCTCATGAATACTCCTCCTAATTTACAGCCTTCACCTATTCCTCTATTAATGAGAGAGCGAAACGCTCGATTGAATCGAACAGTTCAAAGGTTTGAAGAAACCGAACAAGGACCGAATTCTCAGACCTGGATCACTCTCCGATTTGCGAGACCAGCTCGTCCACAAAGGCACATTCCGGGAGCCCCTGACGACAACAGTCCACCTCCGGCCGAGGATTCCGCCATCGAAGGATTGCCGACGGTAAAAGTCACAGAAGCACAATTAACGAGCGATCCGAATTGCGCGATTTGCAAAGACGAATTTCAGCTTGAAATGGAAGTGAAAGAGTTACCGTGCAAGCATTTCTATCATTCGGATTGCATTACGCCTTGGCTTCGCACGCACAATACCTGTCCCATTTGCCGCCATGAGATGCCAAGCGCTTCATCATCATCATCATTTTACAATTATCGTGAAGATTTCTCGCATTTTGATTATCGATATGGTTTTAGGTTTGAAGAAGCTACACAGGGATTGAATTGGATATGGAGCCAGCTTGTTTCTTTACGACCTGTGCGCGCAGTTATGGAATGGACTCAGAGATATTTGTTTGATTTTCATGAAAATGATGATCGACGAGGAGGTGGTCCGTGGTGGCGATCATTGCTGATCATATAG 846 0.4716 MDMRGRPRVVVNGVQRTRTFHYFWCQTCQRAVRIPSSANPNFSSCPFCSHQLHLELDITRPSLLMNTPPNLQPSPIPLLMRERNARLNRTVQRFEETEQGPNSQTWITLRFARPARPQRHIPGAPDDNSPPPAEDSAIEGLPTVKVTEAQLTSDPNCAICKDEFQLEMEVKELPCKHFYHSDCITPWLRTHNTCPICRHEMPSASSSSSFYNYREDFSHFDYRYGFRFEEATQGLNWIWSQLVSLRPVRAVMEWTQRYLFDFHENDDRRGGGPWWRSLLII 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0364 281 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 99 202 - -
Prci11g0364 281 SMART ring_2 157 197 IPR001841 -
Prci11g0364 281 ProSiteProfiles Zinc finger RING-type profile. 157 198 IPR001841 -
Prci11g0364 281 FunFam E3 ubiquitin-protein ligase RING1-like 122 204 - -
Prci11g0364 281 MobiDBLite consensus disorder prediction 117 137 - -
Prci11g0364 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 123 204 IPR013083 -
Prci11g0364 281 Pfam Ring finger domain 156 198 IPR001841 -
Prci11g0364 281 SUPERFAMILY RING/U-box 137 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0364 Prci-Chr11 4121805 4126172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0364 6 259 C3H Transcription Factor Family AT1G68180 37.165 2.87e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0364 K11982 - gmx:100793656 287.345