Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0342 ATGAAGATTCTTGTGGTGCTTCTCTTTCTCTTCTTCTCCATGTTTCTTACTCTCAGCTCTGCAGATCATTCCTCTTCTCCCTCTGTTAACAAATCCACGTGCCCTTTGGATCTGAACTATGTGCTCAGAATCCCGTGGAACTCTTCCATGTGCCAAAATTTCCATCCTTTGCAAACCTTAAATGACACTCGAGGAAGCCATTGTTGCCAAACTTTACTGTCCCTAATTGGCATAGGGCTTGCTCAATACCTTAAAGAAGCCTCCATGTTCAACCTTCCTGATCTTCGTACCTCCAATTCTTGCCTCCATGACTTCCAATCCAAGCTCTCTTCCCTCTCTCTGCCTGATGACCTCACCTCAGCTTGCTTCGACCCGCTTCAATTTGTGGTTAGCCCTAACGTCTGCGCGAAAATCCAAACGATTCCTGATTGGATCGGAAAGCTCGGACAAACTACGCCGCTTAACCAGGGATGCAAACCGGACCTTACTGATCTTACTCTATGCGGTGCGTGCGTGGCGGCGGGTTTTCAGGTTCAGCAGGAACTTACAAACATTGATGGTAACTCTTCCCACGCCACAAATTGCTTTCACTTCGCTATATTGTATGCCGCTGGTATTGTGAATGAGTTTGGACCGGAGAGTAATGGCGCTGTGACTTGCATTTTTGGCATGTCGGTTTATCCGACTTTGGACTCTGGAGAAAATGGTCGCCATCAAGCTCTTGTATTGGGGTTAACTGGAGCTGGGGTTGGGTTATTAGTCATGTTCACTTTGTTGGGTCTGTATCTATGGTATGATAGGAGGTGGAGAAGGAGAAAACAGGAGAGCTTTCGGTTTGATATTGATCCTGAAGAGCAAGGATCTAGGCCTAGATTGAGGCCAAATACTGGGTCAATCTGGTTTAAGATTGAGGAGCTTGAGAAGGCCACTAATGGTTTTTCATCTAAAAACTTCATAGGAAGAGGTGGGTTTGGGATGGTTTACAAGGGAACTTTGGCTGATGGATCGGTGGTAGCAGTTAAGAGGATTTTGGAATCTGATTTTCAAGGGGATGCTGAGTTCTGCAATGAGGTTGAGATTATTAGTAATCTGAAGCACCGTAATCTGGTGCCACTTAGAGGGTGTTGTGTGGTTGAGGAGGGCGAGAGTTATGATGAAAGAGGTCAAAGGTATCTTGTTTATGACTACATGCCAAATGGTAATCTTGAAGATCATCTCTTCCCATCATCAGTGGGCAATCAAAATGAAAATAGATCATTGACTTGGCCACAGAGAAAAAGCATAATCGTGGATGTGGCAAAAGGATTGGGTTACTTGCATTATGGAGTTAAGCCTTCAATTTATCACAGGGACATCAAGGCCACCAATATACTGCTTGATGCAGATATGAGGGCAAGAGTTGCAGATTTTGGGCTTGCTAAGCAGAGCAGGGAAGGTCAGTCTCATCTCACTACTAGAGTGGCTGGAACTCATGGATATCTAGCCCCTGAGTATGCACTATATGGTCAGCTTACTGAGAAGAGTGATGTCTATAGCTTTGGTGTGGTTGTTTTGGAGATAATGTGCGGGAGAAAAGCTCTTGATTTGTCTTTATCAGGATCTCCAAGGGCATTCTTAATCACAGATTGGGCATGGTCCTTGGTGAAATCTGGGAACATAGACGAGGCTTTGGATGCTTCCCTTCTAAAAGATGGCGATTGTCCTAGTTCTAATCCTAGGAGCATAATGGAAAGGTTTTTGCTTGTGGGAATTCTATGTTCTCATGTGATGGTTGCTTTGAGGCCAACAATTTCTGAAGCTTTGAAGATGTTGGAAGGTGATGTTGAAGTTCCAGAAATCCCTGACCGGCCTATGCCTCTTGGACACCCGTCATTTTACAATGATGGTAACAATACATTTAGCATATCTCCAGCGTTAAGTGGCCCAAAATTGCGCAGTGGAGACATGCTCAGGTTCATGGGAAATATTTGA 1971 0.4465 MKILVVLLFLFFSMFLTLSSADHSSSPSVNKSTCPLDLNYVLRIPWNSSMCQNFHPLQTLNDTRGSHCCQTLLSLIGIGLAQYLKEASMFNLPDLRTSNSCLHDFQSKLSSLSLPDDLTSACFDPLQFVVSPNVCAKIQTIPDWIGKLGQTTPLNQGCKPDLTDLTLCGACVAAGFQVQQELTNIDGNSSHATNCFHFAILYAAGIVNEFGPESNGAVTCIFGMSVYPTLDSGENGRHQALVLGLTGAGVGLLVMFTLLGLYLWYDRRWRRRKQESFRFDIDPEEQGSRPRLRPNTGSIWFKIEELEKATNGFSSKNFIGRGGFGMVYKGTLADGSVVAVKRILESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVVEEGESYDERGQRYLVYDYMPNGNLEDHLFPSSVGNQNENRSLTWPQRKSIIVDVAKGLGYLHYGVKPSIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSLSGSPRAFLITDWAWSLVKSGNIDEALDASLLKDGDCPSSNPRSIMERFLLVGILCSHVMVALRPTISEALKMLEGDVEVPEIPDRPMPLGHPSFYNDGNNTFSISPALSGPKLRSGDMLRFMGNI 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0342 656 Pfam SPARK 30 196 IPR043891 -
Prci11g0342 656 ProSiteProfiles Protein kinase domain profile. 313 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0342 656 Pfam Protein kinase domain 315 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0342 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Prci11g0342 656 Gene3D Transferase(Phosphotransferase) domain 1 397 612 - -
Prci11g0342 656 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 397 612 - -
Prci11g0342 656 PANTHER OS01G0750732 PROTEIN 56 612 - -
Prci11g0342 656 SMART serkin_6 313 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0342 656 SUPERFAMILY Protein kinase-like (PK-like) 291 605 IPR011009 -
Prci11g0342 656 CDD STKc_IRAK 319 606 - -
Prci11g0342 656 Gene3D Phosphorylase Kinase; domain 1 284 396 - -
Prci11g0342 656 FunFam probable receptor-like protein kinase At1g11050 273 396 - -
Prci11g0342 656 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0342 Prci-Chr11 3905224 3908350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0342 24 651 Receptor kinase-like Gene Family AT1G11050 65.446 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Prci11g0342 Pkinase 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0342 - - gmx:100806560 988.793