Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0340 ATGGAGAGGGATTCATCTGCAGGGTCACACATGAATCATCATGATGAGCAGAAAGAAGAGCAGAATCATCAAGACTTGGAACAGCCTCATCTTGAAGAAGACTATGAGTCTCCGACTTTCAATCTTCAAAATGTTTCAAAAGTGATTCTTCCTCCATTGGGTGCTTCAAGTTATAATCACAATCCAGCTCACCCCAAGGGATGGATCATATCCCCAATGGACACCAGATACGGGTGTTGGGAGAGTTTCATGGTTGTTCTGGTAGGGTACTCAGCATGGGTATATCCCTTTGAAATAGGGTTTCTGATGTCATCTCCAACTCACAAACTCTACATTGTGGATAATGTTGTCGATCTCTTCTTTGGCGTTGACATTGTTCTCACTTTCTTCCTTGCTTACATTGATCGTTCTACTCAACTACTTGTCCGAGACTCCAAACAAATTGCTCTCAGGTACGTATCGACATGGTTCATAATGGATGTGGCATCAAGCATCCCATATGAGGCATTAGGTTATTTGTTCACAGGCAAACGCAAAGTGGGTCTTACTTTCTTCCTCTTGGGCATCCTTAGACTCTGGAGGCTCCGAAGAGTTAAGCAATACTTCACCAGGCTTGAGAAAGATATCAGGTTCAGCTATTTCTGGGTCAGATGTGTTAGACTTCTTTGTGTAACGTTTTTTATAGCACATTGTGGAGGGTGCCTCTACTACTTGCTAGCTGACGTGTACCCTCATCTAGGGAAGACATGGATAGGATCATTGAATCCAGATTTCAAAGAGACAAGCATTTGGATAAGATACATATCAGCCATGTACTGGTCCCTCACCACCATGACTACTGTTGGCTATGGTGATTTTCATGCTGTCAATCCCATGGAGATGGCCTTCACCATTTCTTACATGCTCTTCAATCTTGGCCTCATTGCTTACTTGATTGGCAGCATGACCAATCTTGTTGTTCAAGGAACTTGTCGTACCATGGAATTTAGAAACAACATTGAAGCAGCATCAAATTTTGTGAGCCGAAATAGAGTTTCTCCAAGGCTGAAAGAGCAGATCATTGCTTATATGTGCTTAAGATACAAGGCAGAGAGCTTAAACCATCATCAGCTTATGGAACAATTGCCAAAATCAATATGCAAAACCATTTGTCAACACTTGTTCCTTCCTGCTGCGGAGAAAGTTTATCTTTTTAAAGGTGTCTCAAGGGAGATCTTGTCGTCCTTGCACTTGAAGAAGCTTCACGATCTAAATACTAAAGAACTGGTGATTGATTGGAATAGAGAAGATGACCCAAATATGGCTGTGAGCTTGTTAAATGTGGCCTCAACTGGCAATGCTGCTTTTCTTGAAGAGCTTTTAAAGGCAGGCTTGGATTCTAGTGTTGCAGACTCCGAAGGCAAAACCCCATTGCACATAGCAGCATTAAAAGGGCATGAAGAGTGTGTAAAAGTGTTACTTAATCATGCATGCAACGTACATGCAAGAGACATAAATGGCAACACTGCACTATGGGACGCCATAGCTTCAAAGTGTTACTCAATATTCAGAATCCTGTACCAGCTTTCTGCACTATCTGATCCACACACAGCAGGTGATCTCCTCTGTAAAGCAGCAAAGAGAAATGACCTGAAAGTGATGAGTGAGCTTCTAAAGCAAGGCTTAAACATAGAGTCCAAAGATCACCATGGTTCAACAGCAATGCAAGTTGCATTGGAAAAGAATCATGTGGACATGATTCAATTGCTTTTCAAGAACGGCCATGAACATGAAGGAGGAGGGCAAGAGCACGTTTGGGGAAGATATAATAATAATAGGCAAATCTATTCAAGAGTTAGCATATTTAGAGGCCATCCTATATTGAGAAGAGAACAAGGTTGCATTGAAGCTGGCAAGATGATAAGGCTGCCTAACTCAATAGAAGAGCTCAAGAGCATTGCAGGTGAAAGATTTGCCTTTGATGCAAAAGATGCAATAGTAATTGATGAAGGAGGAGCAGAGATAGACTCGATTGATTTGATTAGAGATAATGATAAACTTTTTATTGTTGAATAG 2055 0.4146 MERDSSAGSHMNHHDEQKEEQNHQDLEQPHLEEDYESPTFNLQNVSKVILPPLGASSYNHNPAHPKGWIISPMDTRYGCWESFMVVLVGYSAWVYPFEIGFLMSSPTHKLYIVDNVVDLFFGVDIVLTFFLAYIDRSTQLLVRDSKQIALRYVSTWFIMDVASSIPYEALGYLFTGKRKVGLTFFLLGILRLWRLRRVKQYFTRLEKDIRFSYFWVRCVRLLCVTFFIAHCGGCLYYLLADVYPHLGKTWIGSLNPDFKETSIWIRYISAMYWSLTTMTTVGYGDFHAVNPMEMAFTISYMLFNLGLIAYLIGSMTNLVVQGTCRTMEFRNNIEAASNFVSRNRVSPRLKEQIIAYMCLRYKAESLNHHQLMEQLPKSICKTICQHLFLPAAEKVYLFKGVSREILSSLHLKKLHDLNTKELVIDWNREDDPNMAVSLLNVASTGNAAFLEELLKAGLDSSVADSEGKTPLHIAALKGHEECVKVLLNHACNVHARDINGNTALWDAIASKCYSIFRILYQLSALSDPHTAGDLLCKAAKRNDLKVMSELLKQGLNIESKDHHGSTAMQVALEKNHVDMIQLLFKNGHEHEGGGQEHVWGRYNNNRQIYSRVSIFRGHPILRREQGCIEAGKMIRLPNSIEELKSIAGERFAFDAKDAIVIDEGGAEIDSIDLIRDNDKLFIVE 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0340 684 FunFam Potassium channel KAT3 79 321 - -
Prci11g0340 684 Gene3D - 78 321 - -
Prci11g0340 684 Gene3D - 532 593 IPR036770 -
Prci11g0340 684 ProSiteProfiles Ankyrin repeat profile. 563 587 IPR002110 GO:0005515
Prci11g0340 684 Pfam Ion transport protein 79 323 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci11g0340 684 PRINTS EAG/ELK/ERG potassium channel family signature 125 134 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g0340 684 PRINTS EAG/ELK/ERG potassium channel family signature 267 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g0340 684 PRINTS EAG/ELK/ERG potassium channel family signature 293 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g0340 684 PRINTS EAG/ELK/ERG potassium channel family signature 114 124 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g0340 684 ProSiteProfiles Ankyrin repeat profile. 466 498 IPR002110 GO:0005515
Prci11g0340 684 ProSiteProfiles Ankyrin repeat region circular profile. 466 497 - -
Prci11g0340 684 PANTHER POTASSIUM CHANNEL AKT1 42 410 IPR045319 GO:0005249|GO:0006813
Prci11g0340 684 MobiDBLite consensus disorder prediction 1 26 - -
Prci11g0340 684 Gene3D - 404 531 IPR036770 -
Prci11g0340 684 Pfam Ankyrin repeats (3 copies) 441 521 IPR002110 GO:0005515
Prci11g0340 684 ProSiteProfiles Ankyrin repeat region circular profile. 563 587 - -
Prci11g0340 684 SUPERFAMILY cAMP-binding domain-like 325 409 IPR018490 -
Prci11g0340 684 ProSiteProfiles KHA domain profile. 611 684 IPR021789 -
Prci11g0340 684 SUPERFAMILY Voltage-gated potassium channels 72 320 - -
Prci11g0340 684 PRINTS Ankyrin repeat signature 467 482 IPR002110 GO:0005515
Prci11g0340 684 PRINTS Ankyrin repeat signature 546 560 IPR002110 GO:0005515
Prci11g0340 684 Gene3D Helix hairpin bin 324 388 - -
Prci11g0340 684 SMART ANK_2a 563 592 IPR002110 GO:0005515
Prci11g0340 684 SMART ANK_2a 499 530 IPR002110 GO:0005515
Prci11g0340 684 SMART ANK_2a 466 495 IPR002110 GO:0005515
Prci11g0340 684 SMART ANK_2a 531 559 IPR002110 GO:0005515
Prci11g0340 684 Pfam KHA, dimerisation domain of potassium ion channel 611 682 IPR021789 -
Prci11g0340 684 SUPERFAMILY Ankyrin repeat 435 588 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0340 Prci-Chr11 3892959 3899607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0340 410 471 Ion Channels AT4G22200 48.485 1.55e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0340 K21867 - gmx:100798422 612.838