Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0321 ATGGATCGTAAAGTTGATCATCATTCCCAGAAGCCTCCAATCAAGGGAATCAAAGGCATAGAAGAATCAGTTTTCTTGCACGGGGACTTGGATCTACACATAATTGAAGCAAAAAATCTTCCAAATATGGATTTTCATACTGAAACCGTGAGAAAATGTTTCACTGCAGGAAACAATTGTGCACCTCCCTTTGTAAAAGGACTCAAGACACACTCTGGAAAACATAAAATGATCACTAGCGATCCTTATGTCTCTGTCTCTCTAGCAGGGGCTACTGTAGTTCAAACTAGAGTCATATCTAATTGTGAGAACCCTGTGTGGGATGAACGCTTTATTGTGCCAGTTGCTCACCCTGTTCAAAAAGTTGTGTTTCTCGTGAAAGATGATGACGTTTTCGGAGCTGAACTGATTGGAGTCGTGGAGATATCTGCCCAGAAGATTTTGTTGGGAAATACTGTTAATGATTGGTTTCCCATCATCGGCAATGGAAACTGCTTAAAACCTTATCCTGAGTTGCATATTTCTTTGAAGTTTGTGGCCGTGGGAGACAACGATCGGACAAGTTATTTTGGTGTCCCTAATACATATTTCCCCCTCCGGAAAGGTGGGAGTGTGACTCTTTATCAAGATGCTCATGTACCAATTGGTATGCTACCTGAAATTCTACTTGAGGGTGGAAAAGTCTTTAACCAGGGTAGATGCTGGGAGGATATATGCCATGCCATTTTGGAAGCTCACCATTTAATATATGTTATAGGATGGTCTATTTACCACCCTATAAAGCTTGTCAGAGAACCAACAAAACCTATACCTACTGGAGGAGAGCTTTCACTTGGAGAATTGTTGAAATACAAATCACAAGAAGGAGTCCGCGTGGTTATCTTGATTTGGGATGACAGAACATCGCATGACACCTTTTTTTTGAAAACGGAAGGTGTCATGCAGACACATGATGAAGCAACAAAAAAATTCTTTAAACACTCCACTGTCCATTGCGTGCTATCTCCACGTTATCCAAGCAATAAACTCAGTATCTTCAAGCAACATGTTGTGGGAACACTTTTTTCACATCATCAGAAGTGCGTTCTTGTTGACACTCAAGCTTCTGGGAATAATAGGAAAATAACTGCTTTTATTGGTGGCCTGGATCTATGCGATGGCAGATATGATACCCCTGAGCATCGGCTCTTCACTGATCTTGATACTGTCTTTAAAGATGATTTCCACAATCCTATACTTCCGTCGAGTTATACTGGTGGACCAAGAGAACCATGGCATGACTTGCATTGCAAAGTTGAGGGGCCAGCTGCATATGATATATTAACTAATTTTGAGCAAAGATGGAGGAAAGCCAAAAAATGGCGTAACATAAGGCTAAACAAGGTTACAAATTGGCGTGATGATGCCTTGCTTAGGCTTGATCGAATATCATGGATTGTCACACCATCTATTCGTGTTGATGATGATACAAATGTTCACGTAACTCAAGAAAACGATCCTGAGACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTCAAGGGTTTTCCAAAGGACGTTATGGAAGCTAAGGCTCAGAATCTAATCTGTGGAAAAAATTTGAAAGTTGACAAAAGCGTTCATGCTGCTTATGTATATGCAATAAGATCAGCTCAACGCTTCATATATATAGAGAATCAATATTTTCTTGGATCCTCATTTCATTGGCCTTCCTACAAAACTGCAGGTGCAAATAACTTGGTTCCTATGGAGTTGGCTTTGAAAATTGCCAGCAAGATCAGTGCTAAAGAACGTTTTTCTGTGTATATAGTGATCCCCATGTGGCCAGAAGGGGTTCCATCTAGTGCTGCTGTACAAGAAATATTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAGGATTGTTGCTGATGCCCTTAAAAAGGCAGGTCTCGCTGACCGCTGTCACCCACAAGATTATCTCAATTTTTTTTGCCTTGGAAAGCGTGAGCCTCAAATTTCTCCAAGTCCATCACCGGCATTTCATACAGCTGAAAGCCGTGCTTTGGCTTCGGTGAAAAAATTCAGACGGTTTATGATCTATGTTCATGCCAAAGGAATGATAGTTGATGATGAATACGTACTCATTGGATCTGCAAATATTAACGAGAGATCCTTGGATGGTTCAAGGGATACAGAAATCGCAATGGGTGCTTATCAACCAAAATACACAAAGAAAGCAAAGAAGACTCGTCCGCATGGCCAGGTGTATGGTTACCGAATGTCACTGTGGGCTGAACATCTGGGCAGTGTTGAAGATACTCTTGATGAACCGGACCTGCAATGTGTGAGATATGTCAACAACGTTGCCGAACGGAACTGGGCTGCATATGTATCTGATGATGCAGGGATCATGTGGGGACACTTGATGCAGTATCCAGTTCATATCAGCGCAGATGGGACAGTCAGTGCACTTCCAGGTCATGAGACCTTTCCTGACGTTGGTGGTAAAATTCTTGGATCCCCCAACTCTCTCCCGGATGCACTAACCACATGA 2547 0.4201 MDRKVDHHSQKPPIKGIKGIEESVFLHGDLDLHIIEAKNLPNMDFHTETVRKCFTAGNNCAPPFVKGLKTHSGKHKMITSDPYVSVSLAGATVVQTRVISNCENPVWDERFIVPVAHPVQKVVFLVKDDDVFGAELIGVVEISAQKILLGNTVNDWFPIIGNGNCLKPYPELHISLKFVAVGDNDRTSYFGVPNTYFPLRKGGSVTLYQDAHVPIGMLPEILLEGGKVFNQGRCWEDICHAILEAHHLIYVIGWSIYHPIKLVREPTKPIPTGGELSLGELLKYKSQEGVRVVILIWDDRTSHDTFFLKTEGVMQTHDEATKKFFKHSTVHCVLSPRYPSNKLSIFKQHVVGTLFSHHQKCVLVDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFTDLDTVFKDDFHNPILPSSYTGGPREPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRNIRLNKVTNWRDDALLRLDRISWIVTPSIRVDDDTNVHVTQENDPETWNVQVFRSIDSGSVKGFPKDVMEAKAQNLICGKNLKVDKSVHAAYVYAIRSAQRFIYIENQYFLGSSFHWPSYKTAGANNLVPMELALKIASKISAKERFSVYIVIPMWPEGVPSSAAVQEILFWQGQTMSMMYRIVADALKKAGLADRCHPQDYLNFFCLGKREPQISPSPSPAFHTAESRALASVKKFRRFMIYVHAKGMIVDDEYVLIGSANINERSLDGSRDTEIAMGAYQPKYTKKAKKTRPHGQVYGYRMSLWAEHLGSVEDTLDEPEXLQCVRYVNNVAERNWAAYVSDDAGIMWGHLMQYPVHISADGTVSALPGHETFPDVGGKILGSPNSLPDALTT 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0321 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 25 179 IPR035892 -
Prci11g0321 849 Gene3D C2 domain 21 181 IPR035892 -
Prci11g0321 849 Pfam Phospholipase D C terminal 769 839 IPR024632 -
Prci11g0321 849 SUPERFAMILY Phospholipase D/nuclease 543 777 - -
Prci11g0321 849 SMART pld_4 353 388 IPR001736 GO:0003824
Prci11g0321 849 SMART pld_4 695 722 IPR001736 GO:0003824
Prci11g0321 849 SMART C2_3c 29 156 IPR000008 -
Prci11g0321 849 Gene3D Endonuclease Chain A 494 751 - -
Prci11g0321 849 FunFam Phospholipase D delta 225 469 - -
Prci11g0321 849 Pfam Phospholipase D Active site motif 354 388 IPR001736 GO:0003824
Prci11g0321 849 Pfam Phospholipase D Active site motif 696 722 IPR001736 GO:0003824
Prci11g0321 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Prci11g0321 849 Gene3D Endonuclease Chain A 226 470 - -
Prci11g0321 849 Pfam C2 domain 28 159 IPR000008 -
Prci11g0321 849 PIRSF PLD_plant 16 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Prci11g0321 849 PANTHER PHOSPHOLIPASE D 21 838 IPR015679 -
Prci11g0321 849 SUPERFAMILY Phospholipase D/nuclease 194 456 - -
Prci11g0321 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 353 388 IPR001736 GO:0003824
Prci11g0321 849 CDD C2_plant_PLD 24 179 - -
Prci11g0321 849 ProSiteProfiles C2 domain profile. 10 157 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0321 Prci-Chr11 3424377 3434714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0321 25 848 Phospholipase D Gene Family (Wang group) AT4G11850 53.627 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0321 K01115 - gmx:100779740 1357.43