Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0320 ATGATGGCCAAACACACGAACCTCCAGCTTATTGCCTACTCACAAGAGATTGTAGATGGACAGCCAATTTTTGTTTCTTCAAATTGCTTTCCTATTAAGGCTTCGAACTTTGAACCAGCAGGCCATGCCTTCCATTCAGCTGCCCTTAAACTTCTTGGTGTTGAGGAAGATAATCCAGATGGTGATGATAAAAAGGTGGTTGATGATAAGGAACAGATGTATTTTGCATCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCTGGTGTTGGAGACAAGCAACAGGATCACTATGCATTATTGGGTTTGGGCCATTTAAGGTATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTAAGGTATCATCCAGATAAACAGGCTGCTCTTCTGCTTGGTGAGGAGACTGAAGTGGCAAAACAGGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGCAATCCAGGAAGCATATGAAGTACTGATCGATCCGGTAAAAAGAAGAATATATGATTCCACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCTCTGCTAGACTTCTTCAAAGTGTTTGGTCCTGCTTTCATGCGGAATGGACGGTGGTCAGTTAGTCAACCAGTTCCATCTTTAGGAGATGACAATACTCCACTAAAAGAAGTTGATGAATTCTATGATTTCTGGTATGCATTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCTAGGAAGGAAGAGTATGCACGAATTCGTGCTCTTGTTGATAATGCTTATAAGAGAGACCCAAGAATACTGAGGAGAAAGGAAGAGGAAAAGGCTGAGAAGCAAAGGAAAAAGGAAGCTAAGATTCTGGCCAAAAAACTGCAGGAAGAAGAAGCTGCTAGAATTGCAGAAGAAGAGAAGAGACGGAAGGATGAGGAAGAGAGGAAAGCTGCAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGAAAAGAGCGGACTCGTCTTCGAACACTTGCAGCACCTGTCTTGTCAGAGAGACTACATGACATATCTGAGGATGATGTAGAAAGTCTTTGCCTGTCACTCGATATTGAGGAGTTGAGGAGTTTGTGCCAAATGATTGAAGGAAAAATCATCTCAGAGCAAGCGGAAATTCTAAGAGATGCTCATGGTTCAAAAAAAGATGCAGATGACAAGAAAGGTGAGAAAACTGATAAAAATGATGGTTCTGTAAGTGGCAGTGGCAGTGGCAGTGCCTCACTAGGCAATACCAATGAGAAGAAGGAAAACCCTTGGAGTAAAGAAGAAATCGAGCTATTGAGAAAAGGGATGCAAAAATATCCTAAAGGAACTTCTCGTAGGTGGGAGGTCATTTCAGAGTACATTGGTACGGGAAGATCTGTGGAAGAAATTTTGAAGGCAACCAAAACAGTTCTCCTCCACAAGCCTGATTCTTCCAAATCATTTGATGCATTCCTTGAGAAAAGGAAACCTGCACCAACAATTGCTTCTCCTCTCTCAACCCGAGAAGAATTAACTGGTGAATCAACTCCTGGAAGGCCTGAAAACAGTGCTACCTCAACGACAAAGAACTCTGAAGAGTCTCATGGCAAGAGTACTTCCAACAACCCTAAATCTTCTGGTTCGGCTAGTGCCAATGGAGCTTCGTCTAGTTCAGATCAAGATGTGTGGTCTGCTGTTCAGGAAAGAGCACTGGTCCAGGCTCTGAAAGCTTTCCCTAAGGAAACTAACCAGAGATGGGAACGAGTTGCGGCTGCTGTTCCAGGGAAGACTCTGAATCAATGCAAGAAAAAATTTGCAATGCTGAAAGAGAATTTCAGAAACAAGAAAAGTGCAGCTTAA 1962 0.421 MMAKHTNLQLIAYSQEIVDGQPIFVSSNCFPIKASNFEPAGHAFHSAALKLLGVEEDNPDGDDKKVVDDKEQMYFASSDSYSSKSKKKSGVGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRYHPDKQAALLLGEETEVAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCSLLDFFKVFGPAFMRNGRWSVSQPVPSLGDDNTPLKEVDEFYDFWYAFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYARIRALVDNAYKRDPRILRRKEEEKAEKQRKKEAKILAKKLQEEEAARIAEEEKRRKDEEERKAAEAALQQKKVKEKEKKLLRKERTRLRTLAAPVLSERLHDISEDDVESLCLSLDIEELRSLCQMIEGKIISEQAEILRDAHGSKKDADDKKGEKTDKNDGSVSGSGSGSASLGNTNEKKENPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLLHKPDSSKSFDAFLEKRKPAPTIASPLSTREELTGESTPGRPENSATSTTKNSEESHGKSTSNNPKSSGSASANGASSSSDQDVWSAVQERALVQALKAFPKETNQRWERVAAAVPGKTLNQCKKKFAMLKENFRNKKSAA 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0320 653 MobiDBLite consensus disorder prediction 422 440 - -
Prci11g0320 653 Gene3D - 457 514 - -
Prci11g0320 653 ProSiteProfiles Myb-like domain profile. 589 643 IPR001005 -
Prci11g0320 653 ProSiteProfiles SANT domain profile. 592 647 IPR017884 -
Prci11g0320 653 SUPERFAMILY Homeodomain-like 595 650 IPR009057 -
Prci11g0320 653 Pfam DnaJ domain 97 176 IPR001623 -
Prci11g0320 653 MobiDBLite consensus disorder prediction 441 460 - -
Prci11g0320 653 FunFam Myb family transcription factor 591 651 - -
Prci11g0320 653 SUPERFAMILY Chaperone J-domain 93 175 IPR036869 -
Prci11g0320 653 Pfam Myb-like DNA-binding domain 463 504 IPR001005 -
Prci11g0320 653 Pfam Myb-like DNA-binding domain 596 642 IPR001005 -
Prci11g0320 653 MobiDBLite consensus disorder prediction 422 470 - -
Prci11g0320 653 SUPERFAMILY Homeodomain-like 463 506 IPR009057 -
Prci11g0320 653 Gene3D DnaJ domain 80 188 IPR036869 -
Prci11g0320 653 CDD SANT 597 643 IPR001005 -
Prci11g0320 653 ProSiteProfiles Myb-like domain profile. 457 512 IPR001005 -
Prci11g0320 653 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 3 652 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Prci11g0320 653 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Prci11g0320 653 SMART dnaj_3 96 171 IPR001623 -
Prci11g0320 653 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Prci11g0320 653 CDD DnaJ 97 168 IPR001623 -
Prci11g0320 653 CDD SANT 464 504 IPR001005 -
Prci11g0320 653 Gene3D - 587 653 - -
Prci11g0320 653 PRINTS DnaJ domain signature 151 171 IPR001623 -
Prci11g0320 653 PRINTS DnaJ domain signature 49 67 IPR001623 -
Prci11g0320 653 PRINTS DnaJ domain signature 120 135 IPR001623 -
Prci11g0320 653 MobiDBLite consensus disorder prediction 510 596 - -
Prci11g0320 653 MobiDBLite consensus disorder prediction 539 596 - -
Prci11g0320 653 Coils Coil 297 366 - -
Prci11g0320 653 SMART sant 461 513 IPR001005 -
Prci11g0320 653 SMART sant 593 645 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0320 Prci-Chr11 3406733 3410510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0320 98 297 C2H2 Transcription Factor Family AT1G74250 27.615 3.48e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci11g0320 DnaJ 1.5e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0320 K09522 - gmx:100806665 864.759