Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0319 ATGCCATGGACCATTCAAACTTGTGCCATCATGATGGCCAAACACACGAACCTCCAGCTTATTGCCTACTCACAAGAGATTGTAGATGGACAGCCAATTTTTGTTTCTTCAAATTGCTTTCCTATTAAGGCTTCGAACTTTGAACCAGCAGGCCATGCCTTCCATTCAGCTGCCCTTAAACTTCTTGGTGTTGAGGAAGATAATCCAGATGGTGATGATAAAAAGGTGGTTGATGATAAGGAACAGATGTATTTTGCATCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCTGGTGTTGGAGACAAGCAACAGGATCACTATGCATTATTGGGTTTGGGCCATTTAAGGTATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTAAGGTATCATCCAGATAAACAGGCTGCTCTTCTGCTTGGTGAGGAGACTGAAGTGGCAAAACAGGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGCAATCCAGGAAGCATATGAAGTACTGATCGATCCGGTAAAAAGAAGAATATATGATTCCACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCTCTGCTAGACTTCTTCAAAGTGTTTGGTCCTGCTTTCATGCGGAATGGACGGTGGTCAGTTAGTCAACCAGTTCCATCTTTAGGAGATGACAATACTCCACTAAAAGAAGTTGATGAATTCTATGATTTCTGGTATGCATTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCTAGGAAGGAAGAGTATGCACGAATTCGTGCTCTTGTTGATAATGCTTATAAGAGAGACCCAAGAATACTGAGGAGAAAGGAAGAGGAAAAGGCTGAGAAGCAAAGGAAAAAGGAAGCTAAGATTCTGGCCAAAAAACTGCAGGAAGAAGAAGCTGCTAGAATTGCAGAAGAAGAGAAGAGACGGAAGGATGAGGAAGAGAGGAAAGCTGCAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGAAAAGAGCGGACTCGTCTTCGAACACTTGCAGCACCTGTCTTGTCAGAGAGACTACATGACATATCTGAGGATGATGTAGAAAGTCTTTGCCTGTCACTCGATATTGAGGAGTTGAGGAGTTTGTGCCAAATGATTGAAGGAAAAATCATCTCAGAGCAAGCGGAAATTCTAAGAGATGCTCATGGTTCAAAAAAAGATGCAGATGACAAGAAAGGTGAGAAAACTGATAAAAATGATGGTTCTGTAAGTGGCAGTGGCAGTGGCAGTGCCTCACTAGGCAATACCAATGAGAAGAAGGAAAACCCTTGGAGTAAAGAAGAAATCGAGCTATTGAGAAAAGGGATGCAAAAATATCCTAAAGGAACTTCTCGTAGGTGGGAGGTCATTTCAGAGTACATTGGTACGGGAAGATCTGTGGAAGAAATTTTGAAGGCAACCAAAACAGTTCTCCTCCACAAGCCTGATTCTTCCAAATCATTTGATGCATTCCTTGAGAAAAGGAAACCTGCACCAACAATTGCTTCTCCTCTCTCAACCCGAGAAGAATTAACTGGTGAATCAACTCCTGGAAGGCCTGAAAACAGTGCTACCTCAACGACAAAGAACTCTGAAGAGTCTCATGGCAAGAGTACTTCCAACAACCCTAAATCTTCTGGTTCGGCTAGTGCCAATGGAGCTTCGTCTAGTTCAGATCAAGATGTGTGGTCTGCTGTTCAGGAAAGAGCACTGGTCCAGGCTCTGAAAGCTTTCCCTAAGGAAACTAACCAGAGATGGGAACGAGTTGCGGCTGCTGTTCCAGGGAAGACTCTGAATCAATGCAAGAAAAAATTTGCAATGCTGAAAGAGAATTTCAGAAACAAGAAAAGTGCAGCTTAA 1992 0.4217 MPWTIQTCAIMMAKHTNLQLIAYSQEIVDGQPIFVSSNCFPIKASNFEPAGHAFHSAALKLLGVEEDNPDGDDKKVVDDKEQMYFASSDSYSSKSKKKSGVGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRYHPDKQAALLLGEETEVAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCSLLDFFKVFGPAFMRNGRWSVSQPVPSLGDDNTPLKEVDEFYDFWYAFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYARIRALVDNAYKRDPRILRRKEEEKAEKQRKKEAKILAKKLQEEEAARIAEEEKRRKDEEERKAAEAALQQKKVKEKEKKLLRKERTRLRTLAAPVLSERLHDISEDDVESLCLSLDIEELRSLCQMIEGKIISEQAEILRDAHGSKKDADDKKGEKTDKNDGSVSGSGSGSASLGNTNEKKENPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLLHKPDSSKSFDAFLEKRKPAPTIASPLSTREELTGESTPGRPENSATSTTKNSEESHGKSTSNNPKSSGSASANGASSSSDQDVWSAVQERALVQALKAFPKETNQRWERVAAAVPGKTLNQCKKKFAMLKENFRNKKSAA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0319 663 SMART dnaj_3 106 181 IPR001623 -
Prci11g0319 663 MobiDBLite consensus disorder prediction 451 470 - -
Prci11g0319 663 PRINTS DnaJ domain signature 161 181 IPR001623 -
Prci11g0319 663 PRINTS DnaJ domain signature 59 77 IPR001623 -
Prci11g0319 663 PRINTS DnaJ domain signature 130 145 IPR001623 -
Prci11g0319 663 ProSiteProfiles Myb-like domain profile. 467 522 IPR001005 -
Prci11g0319 663 SUPERFAMILY Homeodomain-like 605 660 IPR009057 -
Prci11g0319 663 ProSiteProfiles SANT domain profile. 602 657 IPR017884 -
Prci11g0319 663 MobiDBLite consensus disorder prediction 432 480 - -
Prci11g0319 663 FunFam Myb family transcription factor 601 661 - -
Prci11g0319 663 SUPERFAMILY Homeodomain-like 473 516 IPR009057 -
Prci11g0319 663 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 13 662 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Prci11g0319 663 ProSitePatterns Nt-dnaJ domain signature. 166 185 IPR018253 -
Prci11g0319 663 Gene3D - 597 663 - -
Prci11g0319 663 ProSiteProfiles dnaJ domain profile. 107 189 IPR001623 -
Prci11g0319 663 ProSiteProfiles Myb-like domain profile. 599 653 IPR001005 -
Prci11g0319 663 Gene3D DnaJ domain 90 198 IPR036869 -
Prci11g0319 663 SMART sant 471 523 IPR001005 -
Prci11g0319 663 SMART sant 603 655 IPR001005 -
Prci11g0319 663 MobiDBLite consensus disorder prediction 520 606 - -
Prci11g0319 663 SUPERFAMILY Chaperone J-domain 103 185 IPR036869 -
Prci11g0319 663 Coils Coil 307 376 - -
Prci11g0319 663 MobiDBLite consensus disorder prediction 549 606 - -
Prci11g0319 663 Pfam Myb-like DNA-binding domain 606 652 IPR001005 -
Prci11g0319 663 Pfam Myb-like DNA-binding domain 473 514 IPR001005 -
Prci11g0319 663 CDD SANT 607 653 IPR001005 -
Prci11g0319 663 MobiDBLite consensus disorder prediction 432 450 - -
Prci11g0319 663 Gene3D - 467 524 - -
Prci11g0319 663 Pfam DnaJ domain 107 186 IPR001623 -
Prci11g0319 663 CDD DnaJ 107 178 IPR001623 -
Prci11g0319 663 CDD SANT 474 514 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0319 Prci-Chr11 3406728 3410510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0319 108 307 C2H2 Transcription Factor Family AT1G74250 27.615 4.71e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci11g0319 DnaJ 1.5e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0319 K09522 - gmx:100806665 864.759