Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0317 ATGGCCAATTCAAAGGGATCATCGATGTATTCTGGAAAGCATTCTCAGCTTCCGCCAAAAATTCCATTCCCCTGTGTTTCTCAATCACATTCTGATAATGTCCCAAACCCTATGATTGGTTCAAATGTTGCTCAGAAACCTAGAGAGGGACACAATAACCTCAGGAGGACTTCATCTGAGAGCCTTGTCAATATCATAGAGGAGCAGCCTTCATGGCTTGATGATCTTCTTAATGAACCTGAGACACCTGTTCGTAGAGGTGGCCATCGGCGTTCTTCAAGTGATTCTTTTGCATACTTAGACACATCTAATGCTTTTAACATTAGTTACACAGATCAGGACGAATATCAGTACAAGAATTCGACATCTATTCCATCTTGGGCATCACAAGACATAGATCATGGCAAAGGTGCTTATCAGATACCCATTTATGCAGAAATGAACTCAGCAAAAAAGAAAAATAGGGCTTGGGAATCTTCTGTAAATGCCGTTACACATCCAGGTGGTCCCTCTGGAAGGGACAATGTTGCTTTGCATAGTTCAGGATCATCATGTGCTTCACGTGAAGTAGATGGAAATGCATCAACTGTGAGTGAGAAGTATGAGTCAGTAGAACCTGGTGGACCGGATGCAAAATCGTCTTCTGGAAGAAATGATGGTTCACATGCAAAGCCATCTACATCTGAAACCGATACAAAACGTGCCAAACAGCAATTTGCTCAACGTTCCCGGGTCCGTAAACTTCAATACATTGCTGAGCTGGAAAGAAATGTGCAAGCTTTACAAGTGGAAGGGAATGAGGTATCAGCTGAACTTGATTTTCTTAACCAGCGGAATCTTATTCTGAGTATGGAGAATAATGCCCTCAAGCAACGATTAGAAAATTTAGCGCAGGAGCAGCTTATAAAATATTTGGAGCAGGAAGTCTTGGAAAGAGAGGCTGGAAGATTACGTGCCTTGTATCAGCGGCAGCAGCAGCAGGCACATCATCTGACACCACAGCAATCTTCTTCTGGCCCTCGACGAACAAGGAGCAGAGACCTTGAATCCCAGTTTGCAAACCTTTCTATGAAACACAAGGAGTCAAATTCAGACCGTGACCCTGTGACGGGTCCCCTCCGTAGTTAG 1128 0.4371 MANSKGSSMYSGKHSQLPPKIPFPCVSQSHSDNVPNPMIGSNVAQKPREGHNNLRRTSSESLVNIIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYLDTSNAFNISYTDQDEYQYKNSTSIPSWASQDIDHGKGAYQIPIYAEMNSAKKKNRAWESSVNAVTHPGGPSGRDNVALHSSGSSCASREVDGNASTVSEKYESVEPGGPDAKSSSGRNDGSHAKPSTSETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQVEGNEVSAELDFLNQRNLILSMENNALKQRLENLAQEQLIKYLEQEVLEREAGRLRALYQRQQQQAHHLTPQQSSSGPRRTRSRDLESQFANLSMKHKESNSDRDPVTGPLRS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0317 375 SMART brlzneu 229 288 IPR004827 GO:0003700|GO:0006355
Prci11g0317 375 Coils Coil 251 299 - -
Prci11g0317 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 357 IPR044797 -
Prci11g0317 375 Coils Coil 307 327 - -
Prci11g0317 375 MobiDBLite consensus disorder prediction 323 341 - -
Prci11g0317 375 MobiDBLite consensus disorder prediction 26 40 - -
Prci11g0317 375 MobiDBLite consensus disorder prediction 158 242 - -
Prci11g0317 375 MobiDBLite consensus disorder prediction 323 375 - -
Prci11g0317 375 CDD bZIP_plant_RF2 231 279 IPR044759 GO:0003700|GO:0006355
Prci11g0317 375 MobiDBLite consensus disorder prediction 224 238 - -
Prci11g0317 375 SUPERFAMILY Leucine zipper domain 240 282 IPR046347 GO:0003700|GO:0006355
Prci11g0317 375 Gene3D - 223 302 - -
Prci11g0317 375 MobiDBLite consensus disorder prediction 1 57 - -
Prci11g0317 375 MobiDBLite consensus disorder prediction 176 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0317 Prci-Chr11 3382112 3386710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0317 67 303 bZIP Transcription Factor Family AT3G58120 32.422 6.90e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0317 - - gmx:100813098 476.092