Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0314 ATGTCTGATATTAACATAAATGTTTCGGCGACTTACAAGCAAGAAGTGATCTACAAGGAGTGTCTGCATAACCATGCAGCCTCTCTCGGCCTTGTAGCCAACGATGGTTGCTATGAGTTTCTCAAACCTAACACAAACAACACCGTTGACGGTGACTCCCAGCATGAGTTTCTCTGTGCAGTTTGCAAATGCCACCGGAACTTTCATCGGAAAGAAGTTATCTATACTCCTATCATGCAAATCCACCACCACCAGCAACCAAACTTTCCGGCAAGACGTGGAGGATCGCCAGCAAATGTCGATGTTAACAATAACAACAACATCGCAGGACGGAGGAAGAGGAAGAAGAGGACGATGTTCACGGCAGAGCAACAGAGCCGAATGGGGATTTTCGCTGAAAGGTTGGGTTGGAGGCCTAAAAGAGCTGATAAGGAAGAGATTCTCAATTTTTGCATGCAAATAGGGATCAGTCGTAGAATGTTCATTGTATGGGTCAACAATAACCGGCGAAGGATGAACCAGGATCAAGCCGCGGCTGCCGCCGTCGCCGTGTGA 555 0.4739 MSDININVSATYKQEVIYKECLHNHAASLGLVANDGCYEFLKPNTNNTVDGDSQHEFLCAVCKCHRNFHRKEVIYTPIMQIHHHQQPNFPARRGGSPANVDVNNNNNIAGRRKRKKRTMFTAEQQSRMGIFAERLGWRPKRADKEEILNFCMQIGISRRMFIVWVNNNRRRMNQDQAAAAAVAV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0314 184 Pfam ZF-HD protein dimerisation region 16 73 IPR006456 -
Prci11g0314 184 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 72 IPR006456 -
Prci11g0314 184 Gene3D - 99 175 - -
Prci11g0314 184 NCBIfam homeobox domain, ZF-HD class 113 169 IPR006455 -
Prci11g0314 184 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 170 - -
Prci11g0314 184 ProSiteProfiles 'Homeobox' domain profile. 111 175 IPR001356 GO:0003677
Prci11g0314 184 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 18 73 IPR006456 -
Prci11g0314 184 MobiDBLite consensus disorder prediction 86 106 - -
Prci11g0314 184 SUPERFAMILY Homeodomain-like 103 173 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0314 Prci-Chr11 3360620 3361174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0314 15 176 ZF-HD Transcription Factor Family AT4G24660 34.239 1.85e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci11g0314 ZF-HD_dimer 4.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0314 - - pcin:129285637 353.214