Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0310 ATGGAACTATCAGATTTGCAAACCAACTCGTCCACTCACCACCACCACCACCAGCAGAAGCAGGTCTCTTCGACGACGTCGTCTCAGCTTGTGGTCCCCAGTTTCGATGGCAGGCCTTCGCCTTCTTCGTCTTCGTCGTCCCCTTCTTCCTCATTCATGGGCTCCATCTCCATCCAAGCTGGCCTTTCTTCTTCTTCGACGACGTCTTCGTCGGCTAATTCGTCTTCTTCTGTTTCCTTATCCAATAATTCTTCTTCCGTTTCGGCTACTACTGCCTTGCCTTCTGCTTCCGCTGCTCCTCACCTCATTGATGCCTCCCTGGCTATCGCCACCAGATCTGATGCCCATCCGCCGGCTCGAACCGGAGGGGTTGTGGATGCCGTGAAGAAGACTCAAATTCAGCAGCAGTTGTCGATTTCTACGGCGCTGACGGCGACCGCGAACCCGCCTAAGAGGTCTACCAAGGATAGGCATACCAAGGTGGATGGACGTGGCCGGAGAATTCGAATGCCGGCGACCTGTGCGGCTAGGGTTTTTCAGTTGACGAGGGAATTGGGGCATAAGTCGGATGGGGAGACAATTGAGTGGCTGCTGCAGCAGGCGGAGCCGGCGATCATCGCTGCTACAGGCACCGGCACTATTCCGGCGAACTTCTCGACACTCAACGTGTCGCTGCGCAGTAGCGGCTCGACGATCTCGGCTCCGCCATCGAAGTCCGCTCCGCATACGTTTCACGGCGCGTTGGCTCTCACTGCTCATGGTCACCATAATCCTTATGAAGAAGCTTTCCAACACCACCATCTCTTAGGGTTTAACCCTCACCATCACCACCAGCAGCAGCAGAATCAACCCCATCTACTGACAGCCAATCAGATTGCGGAAGCGATTCCGGTAGGCGGAGGCGGCGGGGAGAGCGGCGGAGGCGACGGGCCCGATAACTATTTGAGAAAACGCTTCAGAGAAGATCTCTTCAAAGAAGATAACCAATCACAAAACGACAGTGGAGGAAGCTCACCCAAGGCATTCAAGAACAATTTACAGCAAATCCCGAAGCAACAGGAGGCAGCTGGATCCTCGGGCTTTCTTCGTCCAACCAGCATACTCCCCGCTGCCGCTACCATGTGGGCGGTAGCTCCGGCTCCGGCGAGTGGCGCAGGCAGCACAATCTGGATGTTACCAGTGAACGCCGGAGGGTCCGGTTCAGGTTCGTCGCCGGAGACACAAATGTGGCAGTTTCCGACGGCCCAAGCTGGTTCTGGAAACAACACGGTACAAGCGCCTCTGCACTTTATGCCCAGGTTCAATCTTCCGGGGGGCCTTGAATTTCAAGGAGGTGGAGGGAGAGGCGGTTCTCTTCAACTGGGTTCCATGATAATGCCTCATCAACAACCATCTCAGCATCTTGGATTGGGTACGTCTGAATCTAACCTGGGCATGCTGGCTGCTCTAAATGCCTATTCCAGAACTGGTTTGAACATGAATTCTGACGGAAATCACCCATTGGAGCACCAACATCAGCAGCAGCAGCAAGCAACAGATAGTGGAGAAGAAGGTCCTAACAGTTCTCAATGA 1572 0.5458 MELSDLQTNSSTHHHHHQQKQVSSTTSSQLVVPSFDGRPSPSSSSSSPSSSFMGSISIQAGLSSSSTTSSSANSSSSVSLSNNSSSVSATTALPSASAAPHLIDASLAIATRSDAHPPARTGGVVDAVKKTQIQQQLSISTALTATANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTISAPPSKSAPHTFHGALALTAHGHHNPYEEAFQHHHLLGFNPHHHHQQQQNQPHLLTANQIAEAIPVGGGGGESGGGDGPDNYLRKRFREDLFKEDNQSQNDSGGSSPKAFKNNLQQIPKQQEAAGSSGFLRPTSILPAAATMWAVAPAPASGAGSTIWMLPVNAGGSGSGSSPETQMWQFPTAQAGSGNNTVQAPLHFMPRFNLPGGLEFQGGGGRGGSLQLGSMIMPHQQPSQHLGLGTSESNLGMLAALNAYSRTGLNMNSDGNHPLEHQHQQQQQATDSGEEGPNSSQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0310 523 ProSiteProfiles TCP domain profile. 154 208 IPR017887 -
Prci11g0310 523 MobiDBLite consensus disorder prediction 21 88 - -
Prci11g0310 523 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 83 484 IPR005333 GO:0003700
Prci11g0310 523 MobiDBLite consensus disorder prediction 139 162 - -
Prci11g0310 523 MobiDBLite consensus disorder prediction 296 315 - -
Prci11g0310 523 MobiDBLite consensus disorder prediction 490 523 - -
Prci11g0310 523 MobiDBLite consensus disorder prediction 1 88 - -
Prci11g0310 523 Pfam TCP family transcription factor 153 279 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0310 Prci-Chr11 3321022 3323355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0310 151 476 TCP Transcription Factor Family AT1G35560 46.646 1.48e-66 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci11g0310 TCP 3.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0310 - - tcc:18607218 503.442