Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0303 ATGGCTCTTCTTCTTACTCTTCTTTTTCTTGCCTTTGTCTTTCTCTTCACCGCCCATTGCTCAGAAGCTATTGCTACTTCGGTCCCTAGCGATGCATTGTCCCTTCTCAGCTTCAAGGACTCTGTCTCTTCCGAATCTTCGGACCTTCTCTCTGGATGGAGTATGGAGTCTTCTGAAAGTTACTGTCAATGGCACGGCGTCACCTGCGAGAATAGGCTTTCTGGCAGAGTTATTGCTTTGAACTTGACTGGACTTCGCGGCGGCAAGCTCGCTTCTTCCATTGGAGACATGTCTGAGCTTCGAGTTTTGTCCATTCCCCTCAATATGTTCTCCGGTGAGATCCCAGAGAGTCTGGGGAAACTTCGGTTTCTCGAGGTTCTTGAGCTTCAAGGAAACAATTTTTCTGGGAGGATCCCTAGCCAAATAAGTTATCTTCCATCTCTTCGCATTCTTAACCTCTCTAATAATGCATTGTCCGGTTCTATGCCCAGTAAATTGGTTGGCTCTGGAAATGCTAGCGTCATTGACTTGTCGAATAATCAGCTTTCCGGTTCAATTGTAGGTAGTTTCAATACTGCCTTTGAATTTTTGAATCATTTGAAGCTGTCCCACAACTTCTTTACAGGCAAAATCCCCTCCGAAATCGGGAAATGCAGAAATTTGAGGACGCTTTTACTCGATGGGAATATCTTGGAAGGAAGTGTCCCTTCCGGGATTGGGTCTATTACGGAACTCAGACTGCTAGATGTCTCTAGAAATAGTCTCACGGGAAGGATCCCAAAAGAGATAGGCAACTGCCGGAAACTGTCAGTGCTTGTGTTGACTGATTTAAACGATCATGCTTCCCCTAATAAGAGCTTGGTGAATAGCTTCAGAGGAGAATTCAATGCTTTTGTTGGAAACATTCCTCCACAGGTGTTGTTGCTTTCAAGTTTAGAGGTTTTATGGGCACCAAGAGCGAATCTTGGCGGACGGTTGCCTAGGGGCTGGACAGATTCATGCTCGCTGAGAGTACTCAACTTGGCAGAGAATTATATTATTGGGGGCATACCAGAAACCTTGGGGATGTGCAGAAATTTAACTTTCCTTGACTTGAGCTCTAACAATTTAGTGGGGTATCTTCCTTCAAAGCAGCTTCAAGTTCCATGTATGATGTACTTCAACGTCAGCTGGAATAACCTATCTGGCATACTTCCAGGATTTGGGAAGGCAAGCTGTGATTTAATCAGAATCCCAGGTGATGCACATGTTGATATTCTAGTTTGGAGATCTTTGATGGGTGCTCTCACTGGATCAGGTTCAGAAGATGATGTTGTCATTAACCATGATTTCAGCTGGAACAGCTTTACGGGATCTTTACCTTCATTCTCACTAGGAGATACTGCAGACAGTAAGATTTCCTACAAGCTATCAATGAATAATAACAAGTTCAGTGGACCTCTACCATATCATCTGGTTTCAAACTGTAATGATCTCAAGATGTTAAAGGTTAACTTGAGTGTGAACCAGCTCTCAGGTGGGAATTCCCAAAAATTGCTTCTTGACTGTTTGCAGTTGACAGAGTTTGAGGCTGCGTACAACCAGATTAGGGGTTCAATTGATCCGCATATTGGTGACTATGCAATGCTCCAACGCCTTGATTTGAGAGGGAACAAACTTACTGGCTTTCTGCCTGATCAATTGGGAAACCTGAAAGACATGAAATGGCTGCTTTTAGGAGGAAACAATTTAACTGGAGAAATCCCTTTTCAACTTGGTCAATTGGCTCCCCTTGTTGTTTTGGATCTATCTCACAATGCTCTTAGTGGCACTATTCCTGCAAGTTTGACAAGCGCCACGACTCTTGAAACTCTGTTGCTAGATCACAACAGGCTCAATGGGGAAATACCTTCATCCTTTTCCACTCTTTCCTGTCTTGTTGATTTTGATGTTTCTTTCAACAACCTGTCTGGTCATATTCCCCATCTTTTTCACCCTAGTGATTGTGACTCCTACAAGGGGAATGTACACCTGCATTCATGCCCTGATCCATACTCTGCCTCCCCTACTTCTCTCCCAATTCCTGTTGAAGTCCAAAATAGGCATAGACCAAAAAAATTGAAGATAGTAATAATAGCTGTGGTCTCTTCAGTCTTCATGGTTCTCTGTGTACTGGGTATAGTTTTGGTGATCACTTTTGGAAGGTACAAGTTTGGTCGGCTCAGTAGCCTTCGAAGCAGGCTGTTAGTGACCTTCCAAGATGTTCCAATTGAACTCAGTTACGATAACATTGTCATAGCCACAGGAAATTTCAGCCTCCAAAATCTAATTGGAACTGGTGGGTTTGGGTCTACTTACAAGGCTGAACTATCCCCTGGTTTCCTTGTTGCCATAAAGAGGTTGTCTTTAGGGAGATTCCAAGGCATTCAACAGTTTGAGAGAGAGATAAGAACCTTAGGGATAATCCGACATAAAAACCTTGTCACTCTGATTGGCTACTACGTAGGAGAGGCCGAAATGTTCTTGATATACAACTACCTTTCAGGTGGGAACCTTGAAACGTTCATACACAACAATTCAGATAAAAACATGTGGCCAATTATCTACAAGATAGCAATAGACATAGCAGAGGCCATAGCTTACCTTCATTACTCCTGCGTTCCTCGTATAGTTCATCGTGACATCAAGCCTAGCAACATCTTACTGGACGAGGATTGCAATGCCTACCTCTCAGATTTTGGATTGGCTAGACTCATGGAGGTATATGAGACCCACGCCACAACTGATGTGGCAGGCACATTTGGGTATGTTGCGCCTGAATATGCCACCACTTGCAGGGTTTCAGACAAGGCAGATGTTTATAGCTTTGGTGTTGTGTTACTAGAATTAATGTCTGGAAGAAAGTCTCTCGATCCATCTTTTTCTGAATATGGAAATGGGTTCAATATTGTCTCGTGGGCTAAGTTGCTAATGACTGAAGGTCGTTCTTCTGAACTGTTCTCACCTGCTTTGAGGGAAGCAGGACCTGAGGAGAAACTGTTGGGGCTTTTAAAAGTTGCGTTAGTCTGCACAGTGGAGACGCTTTCTATTCGGCCATCGATGAAACAGGTTCTTGAGAAATTGAAACAACTTAAAAGTTGA 3120 0.4343 MALLLTLLFLAFVFLFTAHCSEAIATSVPSDALSLLSFKDSVSSESSDLLSGWSMESSESYCQWHGVTCENRLSGRVIALNLTGLRGGKLASSIGDMSELRVLSIPLNMFSGEIPESLGKLRFLEVLELQGNNFSGRIPSQISYLPSLRILNLSNNALSGSMPSKLVGSGNASVIDLSNNQLSGSIVGSFNTAFEFLNHLKLSHNFFTGKIPSEIGKCRNLRTLLLDGNILEGSVPSGIGSITELRLLDVSRNSLTGRIPKEIGNCRKLSVLVLTDLNDHASPNKSLVNSFRGEFNAFVGNIPPQVLLLSSLEVLWAPRANLGGRLPRGWTDSCSLRVLNLAENYIIGGIPETLGMCRNLTFLDLSSNNLVGYLPSKQLQVPCMMYFNVSWNNLSGILPGFGKASCDLIRIPGDAHVDILVWRSLMGALTGSGSEDDVVINHDFSWNSFTGSLPSFSLGDTADSKISYKLSMNNNKFSGPLPYHLVSNCNDLKMLKVNLSVNQLSGGNSQKLLLDCLQLTEFEAAYNQIRGSIDPHIGDYAMLQRLDLRGNKLTGFLPDQLGNLKDMKWLLLGGNNLTGEIPFQLGQLAPLVVLDLSHNALSGTIPASLTSATTLETLLLDHNRLNGEIPSSFSTLSCLVDFDVSFNNLSGHIPHLFHPSDCDSYKGNVHLHSCPDPYSASPTSLPIPVEVQNRHRPKKLKIVIIAVVSSVFMVLCVLGIVLVITFGRYKFGRLSSLRSRLLVTFQDVPIELSYDNIVIATGNFSLQNLIGTGGFGSTYKAELSPGFLVAIKRLSLGRFQGIQQFEREIRTLGIIRHKNLVTLIGYYVGEAEMFLIYNYLSGGNLETFIHNNSDKNMWPIIYKIAIDIAEAIAYLHYSCVPRIVHRDIKPSNILLDEDCNAYLSDFGLARLMEVYETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVSWAKLLMTEGRSSELFSPALREAGPEEKLLGLLKVALVCTVETLSIRPSMKQVLEKLKQLKS 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0303 1039 Gene3D Transferase(Phosphotransferase) domain 1 840 1039 - -
Prci11g0303 1039 SUPERFAMILY L domain-like 296 659 - -
Prci11g0303 1039 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 423 683 - -
Prci11g0303 1039 ProSitePatterns Protein kinases ATP-binding region signature. 770 792 IPR017441 GO:0005524
Prci11g0303 1039 Gene3D Ribonuclease Inhibitor 442 681 IPR032675 -
Prci11g0303 1039 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 96 165 - -
Prci11g0303 1039 Pfam Leucine Rich Repeat 543 564 IPR001611 GO:0005515
Prci11g0303 1039 SMART serkin_6 764 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0303 1039 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 729 839 - -
Prci11g0303 1039 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Prci11g0303 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 883 895 IPR008271 GO:0004672|GO:0006468
Prci11g0303 1039 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 231 1036 - -
Prci11g0303 1039 SUPERFAMILY RNI-like 81 396 - -
Prci11g0303 1039 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 175 407 - -
Prci11g0303 1039 Gene3D Phosphorylase Kinase; domain 1 730 839 - -
Prci11g0303 1039 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 840 1039 - -
Prci11g0303 1039 ProSiteProfiles Protein kinase domain profile. 764 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0303 1039 Gene3D Ribonuclease Inhibitor 283 407 IPR032675 -
Prci11g0303 1039 Gene3D Ribonuclease Inhibitor 191 282 IPR032675 -
Prci11g0303 1039 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Prci11g0303 1039 SUPERFAMILY Protein kinase-like (PK-like) 742 1034 IPR011009 -
Prci11g0303 1039 Pfam Protein kinase domain 766 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0303 Prci-Chr11 3284339 3290118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0303 7 1038 Receptor kinase-like Gene Family AT3G02130 43.635 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Prci11g0303 Pkinase 5.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0303 - - gmx:100795047 1386.32