Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci11g0300 | ATGAAGAAGGATTCAAAACTCGACGACGAAGCTCAGAAATCCCAACAACAAATAGTGGAGTCTGGTTCAGACTCTGGTTATGAGGATTCTTCTCAAGATCATGGGTCAGAGTATTCAGATACATCATCGGAATTTGAAGATGGAGAAAGTGGTTTATCTGGGAATGAGGATCATTTGGCGGATGATAACTCCGAGGATTCAGAAGCTGGAGAAAGTGGATCGTCTGAAGATGAGGACTTTGTCACCACAGGCGGCAGTCATGCATCTGGCGATGTTAATGGTGAAGAAGATGGAAGTGAGGACTCTGAAATTCATCAGGGAGTTGAGAGTGATTCTTCAGAAGATGAGGTGGCTCCCCGTAATACCATTGGAGATGTCCCTTTGAAGTGGTATGAAGATGAGCCTCATATTGGATATGATTTCAAGGGGAAGAAGATAATGAAGAGGGAAAAGCAAGACAAATTAGATTCCTATCTTGCAAGTACTGATGATCCAAGCAGCTGGCGTAAGTACTATGATGAGCTCAACGATGAGGTAGTGGAAATGACCAAAGAAGAGGCCAAAATCTTCTCGAGACTGATCGATGGTCGAGCACCTCATGCTGACTTTGATCCATATCCGGATTATGTTGACTGGTTTAAATGGGATGATGCCATTCATCCATTGTCTAATGCACCTGAACCAAAAAGAAGATTTATACCTTCAAAATGGGAAGCTAGAAAGGTTGTGAGGTATGTTAGAGCAATTCGTAAGGGATTAATAACTTTTGACAAGCCAAAGGAGGAAGATGGTCCCTATCTCTTGTGGGGGGATGATTCTGGTTCAACAGAAAAATCAAATCATCTGGCTTACATTCCTGCACCAAAGCCAAAAGTTCCTGGCCACGAGGAGTCTTACAATCCTCCTTTAGAGTACATTCCAACCCAAGAAGAAATCAATTCTTATCAGTTGATGGATGAGGAAGACCGCCCTAAGTTTATTCCTAAAAGGTTTACATCTCTAAGAAGCATCCCTGCATATGAGAATTATATGAAGGAACGCTTTGATCGTTGTTTGGATCTATTCTTGTGCCCTCGAGTTCGAAAGAAACGTCTTAATATTGATCCTGAATCTTTGAAGCCAAAGCTTCCAAGTCGAAAGGATCTTAAACCTTACCTGGCATGCTATATTGAGTACAAAGGTCATGAAGATGCCGTTACATCAATTTCTGTTGAAGCTTCAGGGCAATGGATGGCATCAGGTTCAAGTGATGGAACTGTTCGTCTCTGGGATGTTCCAACTGGTAGATGTCTTAGACGGTGGGAGGTTGGTGAAGCTGTTACCTGTGTTGCTTGGAATCCTTTGCCTGATATGCGTATTCTTGCTGTCTCTGTGGGACAAGATTTACTTATGTTGAATGCTGGTTTGGGGGATGAAGAAGAGCAGAAAAAGATTTGTGAGCTTCTCCATGTTGAGTCACCTGCACCAGATAACTCAGACAGCATAACCCCTAGTGTGAGCTGGCTTCAAGATAATAAACACGAAGGTTTAAGGTTAAGGCATTTTAAGACTGTTTCCGCTGTAGAATGGCACCGAAAAGGTGATTACTTTTCAACAGTGATTCCAGCTGGTGAGTCAAGAGCGGTTCTGATTCACCAGTTATCAAAGAAGCTTACGCAAAAGCTTCCATTCAAGTTGCATGGACTTGCTGTTAGGTCAACTTTCCATCCAACCCGTTCCTTCTTCTTTGTTTGTACTAAAAAGACTGTCCGTGTGTATGATCTGTTGAAGACCAAGCTCATAAAAAAGCTTGATACTGGACTTCGTGAAGCCTCCTCCATTGCTGTTCATCCAGCAGGTGATAATCTGATTGTGGGAAGTAAAGAAGGGAAGATGTGTTGGTTTGATATGGATCTTTCATCTAAACCTTACAGAGTTCTTAAGTGTCACCCAAAAGATGTCAACAATGTGGTCTTTCATCGATCATACCCGTTGTTTGCTTCGTGTTCAGATGACAGCACTGCATACGTTTTTCATGGAATGGTTTATTCTGATCTCAATCAAGACCCTCTTATTGTTCCTTTGGAAATTCTCCGTGGCCATACAAGTTCAAATGGAAGAGGGATACTGGACTGTAAATTCCACCCAAGCCTGCCTTGGCTATTCACTGCTGGTGCTGATAGAGTTATTAAACTCTACTGTCATTAA | 2187 | 0.423 | MKKDSKLDDEAQKSQQQIVESGSDSGYEDSSQDHGSEYSDTSSEFEDGESGLSGNEDHLADDNSEDSEAGESGSSEDEDFVTTGGSHASGDVNGEEDGSEDSEIHQGVESDSSEDEVAPRNTIGDVPLKWYEDEPHIGYDFKGKKIMKREKQDKLDSYLASTDDPSSWRKYYDELNDEVVEMTKEEAKIFSRLIDGRAPHADFDPYPDYVDWFKWDDAIHPLSNAPEPKRRFIPSKWEARKVVRYVRAIRKGLITFDKPKEEDGPYLLWGDDSGSTEKSNHLAYIPAPKPKVPGHEESYNPPLEYIPTQEEINSYQLMDEEDRPKFIPKRFTSLRSIPAYENYMKERFDRCLDLFLCPRVRKKRLNIDPESLKPKLPSRKDLKPYPXACYIEYKGHEDAVTSISVEASGQWMASGSSDGTVRLWDVPTGRCLRRWEVGEAVTCVAWNPLPDMRILAVSVGQDLLMLNAGLGDEEEQKKICELLHVESPAPDNSDSITPSVSWLQDNKHEGLRLRHFKTVSAVEWHRKGDYFSTVIPAGESRAVLIHQLSKKLTQKLPFKLHGLAVRSTFHPTRSFFFVCTKKTVRVYDLLKTKLIKKLDTGLREASSIAVHPAGDNLIVGSKEGKMCWFDMDLSSKPYRVLKCHPKDVNNVVFHRSYPLFASCSDDSTAYVFHGMVYSDLNQDPLIVPLEILRGHTSSNGRGILDCKFHPSLPWLFTAGADRVIKLYCH | 729 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci11g0300 | 729 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 393 | 434 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | MobiDBLite | consensus disorder prediction | 61 | 75 | - | - | |
Prci11g0300 | 729 | SUPERFAMILY | WD40 repeat-like | 351 | 727 | IPR036322 | GO:0005515 | |
Prci11g0300 | 729 | SMART | WD40_4 | 549 | 588 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | SMART | WD40_4 | 685 | 728 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | SMART | WD40_4 | 386 | 425 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | SMART | WD40_4 | 428 | 467 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | SMART | WD40_4 | 591 | 630 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | SMART | WD40_4 | 634 | 673 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 412 | 426 | IPR019775 | - | |
Prci11g0300 | 729 | Pfam | BOP1NT (NUC169) domain | 131 | 386 | IPR012953 | GO:0006364 | |
Prci11g0300 | 729 | MobiDBLite | consensus disorder prediction | 279 | 302 | - | - | |
Prci11g0300 | 729 | Pfam | WD domain, G-beta repeat | 636 | 671 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | Pfam | WD domain, G-beta repeat | 688 | 727 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | Pfam | WD domain, G-beta repeat | 389 | 425 | IPR001680 | GO:0005515 | |
Prci11g0300 | 729 | MobiDBLite | consensus disorder prediction | 1 | 129 | - | - | |
Prci11g0300 | 729 | Gene3D | - | 376 | 729 | IPR015943 | GO:0005515 | |
Prci11g0300 | 729 | PANTHER | RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN | 11 | 729 | IPR028598 | GO:0042254 | |
Prci11g0300 | 729 | MobiDBLite | consensus disorder prediction | 99 | 118 | - | - | |
Prci11g0300 | 729 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 393 | 430 | - | - | |
Prci11g0300 | 729 | SMART | BOP1NT_2 | 131 | 386 | IPR012953 | GO:0006364 | |
Prci11g0300 | 729 | FunFam | Ribosome biogenesis protein BOP1 homolog | 376 | 728 | - | - | |
Prci11g0300 | 729 | Hamap | Ribosome biogenesis protein @gn(BOP1) [BOP1]. | 1 | 728 | IPR028598 | GO:0042254 | |
Prci11g0300 | 729 | MobiDBLite | consensus disorder prediction | 14 | 29 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci11g0300 | Prci-Chr11 | 3275945 | 3282177 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci11g0300 | 393 | 623 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 24.051 | 3.72e-06 | 47.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci11g0300 | K14824 | - | gmx:100803648 | 1159.44 |