Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0294 ATGGAAGAATCAAGAGGCCAGCAAGCTGGTGGAAGCATTTTGAAGAACAAGAAGGTGTTAGAGAATTACAGGTTGGGAAAAACAATTGGGAAAGGATCATTCAGCAAGGTGAAGATTGCAGAGCATATATTGACAGGCCATGAAGTTGCCATTAAGGTTCTGAAACGAAGTAAGATCGAGATCATGAACATGGAAGAAAAAGTTGAAAGGGAGATCAGAGTTGCAAAAATGTTGGTACACCCTCATATTGTGAGAGTCTATGAGGTTATAGAAACAGAATCAGAGATATATATTGTCATGGAGTACCTTAAATTTGGCGAGCTTTTTGAATACATATCAAATAAAGGAAGCCTGGAAGAAGACGAAGCCCGTCAGTATTTCCAGCAAATAATATCTGGAATTGAATACTGTCACAAGAACATGGTGGTTCACAGAGACCTAAAGCCCGAGAATCTGCTTCTGAGCTCCATAGGCTATCTCAAGATTATTGATTTTGGATTGAGCAATGTCATGCGTGAAGGTCACTTCCTTCAAACATGTTGCGGTAGCCCAAACTATGTTGCTCCAGAGATTATAGCTGGAAATCAGTATGCAGGACCAGAAGTAGATGTGTGGAGCTGTGGAGTAATTCTATATGGTCTTCTATGTGGGCGTCTTCCTTTTTATGAGCCAAACCTTGCAATGCTTTATGTTAACATAAAGGGTGGGATATATACTCTTCCAAAGGGGATATCAAGTGGAGCAAGAGATTTGATAGTAAGGATGCTGGAGGTTGATCCCATTAAGAGGATCACCATTTCTGATATCCGCCGCCACCCTTGGTTTCAGGCTCATCTTCCAACGTGTTTAGCTGCTCCGCCGCCAGATATGGTGGAATTAGCCAGCAAGATTGATGATGAAATTCTTCAAGTAGTTAGCATGGGGTTTGATAGGAATCAACTAGTTGATTCTCTCAGCAGGCTCGAACAAAATGAGGCAACTGTTGTGTACTATTTGTTAGTGGACAATCAGTTTCAAGAATCCGGTGGGCATATCTGA 1038 0.4152 MEESRGQQAGGSILKNKKVLENYRLGKTIGKGSFSKVKIAEHILTGHEVAIKVLKRSKIEIMNMEEKVEREIRVAKMLVHPHIVRVYEVIETESEIYIVMEYLKFGELFEYISNKGSLEEDEARQYFQQIISGIEYCHKNMVVHRDLKPENLLLSSIGYLKIIDFGLSNVMREGHFLQTCCGSPNYVAPEIIAGNQYAGPEVDVWSCGVILYGLLCGRLPFYEPNLAMLYVNIKGGIYTLPKGISSGARDLIVRMLEVDPIKRITISDIRRHPWFQAHLPTCLAAPPPDMVELASKIDDEILQVVSMGFDRNQLVDSLSRLEQNEATVVYYLLVDNQFQESGGHI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0294 345 Pfam UBA/TS-N domain 300 332 IPR015940 -
Prci11g0294 345 SUPERFAMILY Protein kinase-like (PK-like) 19 307 IPR011009 -
Prci11g0294 345 CDD UBA_SnRK1_plant 297 336 - -
Prci11g0294 345 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Prci11g0294 345 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 296 335 IPR015940 -
Prci11g0294 345 FunFam Serine/threonine-protein kinase ppk25 17 277 - -
Prci11g0294 345 SMART uba_6 297 334 IPR015940 -
Prci11g0294 345 Gene3D Transferase(Phosphotransferase) domain 1 14 344 - -
Prci11g0294 345 Coils Coil 54 74 - -
Prci11g0294 345 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 17 279 - -
Prci11g0294 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Prci11g0294 345 SMART serkin_6 23 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0294 345 FunFam Non-specific serine/threonine protein kinase 7 104 - -
Prci11g0294 345 ProSiteProfiles Protein kinase domain profile. 23 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0294 345 Pfam Protein kinase domain 23 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0294 Prci-Chr11 3182106 3184435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0294 22 276 CBL-interacting serine-threonine protein kinases AT1G01140 48.837 1.40e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Prci11g0294 Pkinase 2.1e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0294 K07198 - gmx:547544 476.478