Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0278 ATGGCTAATAGATTTCCATGGCAATACTCAAGCACAGGTTTGGCATCCATCATGAGCCTATTTCAATCTATCATATTTGCATTTTGCTTTGAGAGAGATTGGAATCAATGGAAGCTTGGTTGGGACCTCAAGCTTCTCACTGCAGCTTACACAGGCATAATGACATCTGGGGTGGGTTTTGTCCTAGAAGCATGGTGTGTGATGAAGAAGGGACCTTTATTTGCGGCCATTTTTAATCCTCTCATGCTTGCTCTGACCGTCCTTGCTGGCTCTTTACTATTTGATGAAACTCTCTACGTTGGAAGATTTCTCTTTTCAACTTCCTTCATTGTTCCTCTTGCTCTCTTCTTTGAAAGGGAAAGCCTCCAAGCAATTAATGGGACAGTTCTATTCCAAGTTTTCCTTTGTGGATTATTTGGGGGATCCTTGCTACAAAATCTTTTTCTTCATTCCTTTTCCTTCGTATCAGTATCATATGCCACTGCTGTGATGAACGTCGTTCCTTTAGCTACCTACATCATAGCTGTCTTATTCAGACTGGAGAGGATGAACTTAACAACAGCAGCAGGGAAGGCAAAGATATTAGGGACCCTCACAGGAATCAGTGGAGCCATGATACTTACTTTCTGCAAGGGCAAGAGAATCCAAATCTGGACAGCCCGTATTAATTTGACATGCCACGTGGCAGTATCGCATGCCACCTCCACTACTTCTAGCATTTGGGGCTGCATGATTGCTCTTGGTGCCTGCCTCAGTTACTCCTTGTGGTTGATAATCCAGGCAAAGATGGCACAGAAATTTCCATGGCAATGCTCCAGCACAGCTTTAATGTCCATCATGAGCTCATTTCAAGGTGTCATATTTGCGTTTTGCATTGAGAGAGACTGGAATCAATGGAAGCTTGGCTGGGACCTTAGGCTTCTCACTGCAGTTTACACAGGCATAATGTCATCTGGGGTGGCTTTTTCCATAGTAGCATGGTGTGTGATGAAGAAGGGACCTTTTTTTGTGGCCATTTTTAATCCTCTCATGCTCGCTCTGACCGTCCTTGCCGGCTCTTTACTACTTGATGAAACTCTATATATTGGAAGTCTGATAGGGATGATGTTGATTGTGAGTGGACTGTACATAGCGTTATGGGGTAAAAGTAAGGAAGCAAACAAAGCATCAGAGAATTCAAGAGCCTCTCTTCCATCTGAATCCTTTCAAATTTGTGAAACAAACTCAAGGCGGAGTCTTACAAAGGGATGA 1251 0.4341 MANRFPWQYSSTGLASIMSLFQSIIFAFCFERDWNQWKLGWDLKLLTAAYTGIMTSGVGFVLEAWCVMKKGPLFAAIFNPLMLALTVLAGSLLFDETLYVGRFLFSTSFIVPLALFFERESLQAINGTVLFQVFLCGLFGGSLLQNLFLHSFSFVSVSYATAVMNVVPLATYIIAVLFRLERMNLTTAAGKAKILGTLTGISGAMILTFCKGKRIQIWTARINLTCHVAVSHATSTTSSIWGCMIALGACLSYSLWLIIQAKMAQKFPWQCSSTALMSIMSSFQGVIFAFCIERDWNQWKLGWDLRLLTAVYTGIMSSGVAFSIVAWCVMKKGPFFVAIFNPLMLALTVLAGSLLLDETLYIGSLIGMMLIVSGLYIALWGKSKEANKASENSRASLPSESFQICETNSRRSLTKG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0278 416 PANTHER WAT1-RELATED PROTEIN 2 100 IPR030184 GO:0016020|GO:0022857
Prci11g0278 416 Pfam EamA-like transporter family 241 379 IPR000620 GO:0016020
Prci11g0278 416 Pfam EamA-like transporter family 100 194 IPR000620 GO:0016020
Prci11g0278 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 299 384 - -
Prci11g0278 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 103 - -
Prci11g0278 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 102 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0278 Prci-Chr11 3015177 3022585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0278 73 393 Nodulin-like Gene Family AT1G25270 37.578 1.06e-70 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0278 - - pcin:129285620 809.29