Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0239 ATGGCAGATAGCTTACTAAGTTTTGTGCTGGAGAACTTGTCTCGGCTTGTGCAACACGAAGCCCATTTGCTATGTGGCGTGGAGGACAAAGTGAATTCCCTTCAGAGCGAGCTCAGAATGATGAGTGTCTTCCTCAAGAGCTGCGAGCAGGACAAGATGAAGAAGGAAATCGAACAAGAGGTTGTGCGTCAGATCACAGATGTCGCACATGAAGCTGAGGACGTCATCGACACCTTTGTTGCCAACGTTGCCAGATACCGAAGGAGAAGTTGGTTGTCCAGGATGTTCCATGGCGTTGACCATGCAAAGCTGCTACACCATGTTGCAGAGAAAATAGACAACATTAAAGCCACCATCAATCAGATTTATGAGAACAGAATCAAATACGACACCCAGGAAGCAGCAGGATCTTCAACAGAGGAATTACAACTATTGTATAAGCGTAGGAGGGACGTGGAGGAAGAAGATGTGGTGGGGTTTCACCATGACTCAACTGAAGTAATCAATCGCCTCAAGCAAGGAGCTTCACGTCTTGATGTGGTGTCCATTATAGGTATGGGCGGATTAGGTAAAACTACTCTTGCTCGTAAGATCTATAACAGTCATGATGTCAAGAATTACTTCGATTGTCGTGCTTGGGTTTATGTGTCTAACGACTATAGACCTAGAGAGCTTTTGCACGCCCTTCTTAAATGCTTGACGTCAATCTCTGCAAATACATGTTATGAAAACAGCAATAGCAAGCATAAGAAGAGATCAAAGGGCAAAGGCAAACTTAAATTCGAGGATGATTATGGTTTGAGTGAGGAGGAACTGAAAGACAAGGTGCGAGGGTGTTTAAAAGGGAAGAGGTATCTTGTAGTCTTGGATGACATATGGAAACCTCAACATTGGGATGACCTACAATGTGCTTTTCCAGATTACAATAAGAGCAGTAGGATCTTGATTACCAGTCGTTTGAAAGAGGTGGCTTCTCATGCCAGCTCATCTCCTCCCTACTATCTCCCTTTTCTTAATGAAGAAGAAAGTTGGGAGCTTTTCTCAAAGAAGGTGTTCCGAGGAGAGGACATGCCTTCAAATCTAGAGCCGCTAGGTAAGCATATGGTAAAAAGTTGTGGTGGCTTGCCAATCTCCATTGTGGTGCTAGCAGGAATTCTGGCAAACAAGGATAAGACATTCCGAGAATGGTCCAAGATCATGGGCCATGTCAACTCGTATCTCACCCAACCAGAGACCCAAGTCCAGGATATAGTACTTGAACTCAGTTATGATAGCTTGCCTCGAAGATTGAAGCCATGCTTTCTATATTTTGGCATGTTTCCTGAAGATTACGAGATTCCTGTTAGACGCTTGATCCAGCTATGGGTTGCAGAAGGATTCATTCTTCATAATGGTTCCAGAATTGCAGAGGATGTTGCAGAGGACTACTTGGATGAGCTCATTGATCGTAGCTTAATCCAAGTAGGGAGAAGGAGAAGCGATGGGGGAATCAAGACATGTCGTATCCATGATCTTCTAAGAGAACTTTGCATATCCGAGAGCAAGGAGGAAAAGGTTTCTGAAGTTTGTAGGGATGTGGACATTCTGGAGCAAACCAAACCTCGCAGGCTATCCATTCAATATAGCGTGTCTGATTATCTTGTTTCAAGCAACAAAGATCATTCTGGTACTCGTTCTGTGCTCTGCTTTTATCGAGACTCCTACTACCACCTTGATTCAAACAAGTCAAAAAGGCTTGTGAAATGTTTTCAGCTTGTTCGAGTGTTGGATTTGGGGCTTCCTATTTACCACTGTAATAAGATCCCTCCCCATTTGGACAAGTTCGTGCATCTAAGGTACTTAAGAATAGACATAGAGACAAGCTTTGGTCGAATTTTTGTTAGGGAGATTCCTAAATTCCTATGCAATCTTTGGAATCTAGAAACATTGGACTTGGGGCGTTCACATTATAATATATCCATACCCTTCACCAGTGGAATGTGGAAGCTCAAGAGACTGAGGCATCTTCATACGGCTGGACCTGTGGTCTTGCCTGATTTTCCAGATGTAGAAAGTAATATCATGTGGAATCTACAAACCCTATCCTGTGTCGCCATAAACAAAAAATCAGCTGTTGTGTCTCTGATAGGGAAAGGTGTATTCCCAAAGCTAAGGAGATTGGGGTTGCATTTCTATGAGGATAACAAGCATAAACAAGGGCTTGGTCAATTGTGGAAAAACCTTCCAAACCTCAATTATCTGAATGCATTGAAGATTTATGGTTGTCCAGAAATTCCAACGTCTGTCAATGCCTTTCCTTTCAACCTTACCAAACTAGCAATCTTGGGCATGAACTTAAGTAACGATGTCATCAGCACTTTGGGGAGTCTTAACAACCTCAGAATTTTGAAACTATCTTCATTCGAGTTTTCGAATGCCTCAAGATCTGAGTTAGAGCTTTGTTGCATTGCTGGGTTTCCCCAACTAGAAGTGTTTCAAATGAGACATTTGGAGCTCTATCGCTAG 2505 0.4291 MADSLLSFVLENLSRLVQHEAHLLCGVEDKVNSLQSELRMMSVFLKSCEQDKMKKEIEQEVVRQITDVAHEAEDVIDTFVANVARYRRRSWLSRMFHGVDHAKLLHHVAEKIDNIKATINQIYENRIKYDTQEAAGSSTEELQLLYKRRRDVEEEDVVGFHHDSTEVINRLKQGASRLDVVSIIGMGGLGKTTLARKIYNSHDVKNYFDCRAWVYVSNDYRPRELLHALLKCLTSISANTCYENSNSKHKKRSKGKGKLKFEDDYGLSEEELKDKVRGCLKGKRYLVVLDDIWKPQHWDDLQCAFPDYNKSSRILITSRLKEVASHASSSPPYYLPFLNEEESWELFSKKVFRGEDMPSNLEPLGKHMVKSCGGLPISIVVLAGILANKDKTFREWSKIMGHVNSYLTQPETQVQDIVLELSYDSLPRRLKPCFLYFGMFPEDYEIPVRRLIQLWVAEGFILHNGSRIAEDVAEDYLDELIDRSLIQVGRRRSDGGIKTCRIHDLLRELCISESKEEKVSEVCRDVDILEQTKPRRLSIQYSVSDYLVSSNKDHSGTRSVLCFYRDSYYHLDSNKSKRLVKCFQLVRVLDLGLPIYHCNKIPPHLDKFVHLRYLRIDIETSFGRIFVREIPKFLCNLWNLETLDLGRSHYNISIPFTSGMWKLKRLRHLHTAGPVVLPDFPDVESNIMWNLQTLSCVAINKKSAVVSLIGKGVFPKLRRLGLHFYEDNKHKQGLGQLWKNLPNLNYLNALKIYGCPEIPTSVNAFPFNLTKLAILGMNLSNDVISTLGSLNNLRILKLSSFEFSNASRSELELCCIAGFPQLEVFQMRHLELYR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0239 834 Gene3D - 137 331 IPR027417 -
Prci11g0239 834 SUPERFAMILY L domain-like 501 829 - -
Prci11g0239 834 PRINTS Disease resistance protein signature 635 651 - -
Prci11g0239 834 PRINTS Disease resistance protein signature 180 195 - -
Prci11g0239 834 PRINTS Disease resistance protein signature 372 386 - -
Prci11g0239 834 FunFam Probable disease resistance protein At1g63360 423 512 - -
Prci11g0239 834 Pfam NB-ARC domain 165 409 IPR002182 GO:0043531
Prci11g0239 834 Pfam Rx N-terminal domain 6 88 IPR041118 -
Prci11g0239 834 Gene3D - 423 513 IPR036388 -
Prci11g0239 834 Gene3D Ribonuclease Inhibitor 568 832 IPR032675 -
Prci11g0239 834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 437 IPR027417 -
Prci11g0239 834 CDD RX-CC_like 2 122 IPR038005 -
Prci11g0239 834 PANTHER DISEASE RESISTANCE PROTEIN RP 31 826 IPR044974 GO:0006952
Prci11g0239 834 Gene3D - 6 122 - -
Prci11g0239 834 FunFam Probable disease resistance protein At1g61300 143 331 - -
Prci11g0239 834 Gene3D - 337 422 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0239 Prci-Chr11 2757353 2760246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0239 158 509 WRKY Transcription Factor Family AT5G45050 24.716 5.68e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0239 - - pcin:129285390 1659.04