Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0238 ATGGCTTCTTCTCATCATAATAACCCTAAGGAAACCCTACCAAGCCATGTTGAGATCCCTGTAATTAACCCTAATGAAGAAGAAGACCACATCAACACCATTAACTACTCTCAAAGGGCACAATGGCTTAGGGCTGCAATGTTAGGAGCCAATGATGGGCTGGTTACTGTGACTTCACTCATGATAGGTGTTGGTGCTGTCAGACAAGACATCAGAGCCATGCTCCTCGCCGGCTTCGCGGGTCTAGTCGCCGGAGCTTGTAGCATGGCCATAGGGGAGTTTGTGTCAGTGTACACTCAGAGAGACATAGAGTTAGCTCAGATGAAGAGAGAAAGAGCAGCTAACAACAACACAAAAGAGGTTGAAGATGATGAGAAGGACAAGCTTCCGAATCCAGTTCAGGCTGCCGCAGCATCAGCGCTGGCATTTTCCGCCGGTGCAGTGGTGCCGCTGGTCGGAGCTGTGTTTATAAGGGATTATAGGGTGAGGATGGCGGTGGTGGCTGCCCTGGCTAGCTTGGCATTGATGGTTTTCGGTGGCGTCGGAGCGGTGATCGGAAAAACTTCAGTGAGAGGGTCTTGTGTTAGGGTTGTGATCGGAGGTTGGATGGCCATGGCTATCACTTTTGGCTTGACCAAGTTAATTGGCTTCACCGGACTTTGA 663 0.5023 MASSHHNNPKETLPSHVEIPVINPNEEEDHINTINYSQRAQWLRAAMLGANDGLVTVTSLMIGVGAVRQDIRAMLLAGFAGLVAGACSMAIGEFVSVYTQRDIELAQMKRERAANNNTKEVEDDEKDKLPNPVQAAAASALAFSAGAVVPLVGAVFIRDYRVRMAVVAALASLALMVFGGVGAVIGKTSVRGSCVRVVIGGWMAMAITFGLTKLIGFTGL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0238 220 Pfam VIT family 43 124 IPR008217 GO:0005384|GO:0030026
Prci11g0238 220 Pfam VIT family 125 212 IPR008217 GO:0005384|GO:0030026
Prci11g0238 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 25 215 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0238 Prci-Chr11 2746568 2747493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0238 22 220 Nodulin-like Gene Family AT3G43660 61.809 4.37e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0238 K22736 - gmx:100790996 262.692