Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0230 ATGGGAGATTCAGAGCATCACAGGGATAACAATAATGCCAATCTTCCCCCTGGCTTTCGCTTTTATCCTTCAGATGAAGAGCTTGTTGTCCACTTCCTTCACAGAAAAGCTTCCCTCTTGCCTTGCCACCCTGATGTCATCCCTGATCTTGACCTCTTCCCCTACGATCCTTGGGATCTTCACGGGAAAGCTCTGGGTGAAGGGAATCAATGGTACTACTTCAGCAGAAGGACACAGAATCGAGTGAGTAATAATGGGTACTGGAAGCCAATGGGAATGGAAGAGCCAATACTGACAGACTCAGGAACTAAAATTGTTGGAGTCAAGAAATATTTCATCTTCTTCATGGGAGAATCACCTTCTGGTATCAAGACCAATTGGATAATGCAGGAGTATCGCCTATCAGATTCTGCTTCGTCTTCTTCTTCATCTTCATCTTCTAGCAGATCATCATCAAAGAGGAAATCTAAAACAGACCACTGTAAATGGGTGATTTGTCGAGTCTACGAGCGTGATGAGGATGATAATGATGGTGGTGGTGGTGATGGAGGAACTGAGCTCTCGTGTTTGGATGAAGTTTTCTTGTCACTGGATGATCTTGATGAAATCAGCCTTCCCAATTAG 624 0.4423 MGDSEHHRDNNNANLPPGFRFYPSDEELVVHFLHRKASLLPCHPDVIPDLDLFPYDPWDLHGKALGEGNQWYYFSRRTQNRVSNNGYWKPMGMEEPILTDSGTKIVGVKKYFIFFMGESPSGIKTNWIMQEYRLSDSASSSSSSSSSSRSSSKRKSKTDHCKWVICRVYERDEDDNDGGGGDGGTELSCLDEVFLSLDDLDEISLPN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0230 207 MobiDBLite consensus disorder prediction 137 159 - -
Prci11g0230 207 SUPERFAMILY NAC domain 12 170 IPR036093 GO:0003677|GO:0006355
Prci11g0230 207 PANTHER NAC TRANSCRIPTION FACTOR 56 15 176 - -
Prci11g0230 207 Gene3D NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
Prci11g0230 207 FunFam NAC domain-containing protein 104 24 174 - -
Prci11g0230 207 MobiDBLite consensus disorder prediction 137 151 - -
Prci11g0230 207 Pfam No apical meristem (NAM) protein 16 134 IPR003441 GO:0003677|GO:0006355
Prci11g0230 207 ProSiteProfiles NAC domain profile. 15 171 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0230 Prci-Chr11 2661220 2663060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0230 1 172 NAC Transcription Factor Family AT1G61110 42.222 1.45e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci11g0230 NAM 2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0230 - - pcin:129287174 402.905