Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0211 ATGCGGAAGACAGGTGATGCCCTGAATGCATTGAAGACCAGTGTGGCCGATCCTAACAATGTTCTTCAAAGTTGGGATCCTACCCTTGTAAATCCCTGCACGTGGTTTCATGTTACATGCAACAGTGACAATAGTGTGACCCGGGTTGATCTTGGAAATGCAAACCTTTCGGGTCAACTGGTTTCACAGCTCGGTCAGCTCACAAATTTGCAATACTTGGAACTTTATAGTAATAATATAAGTGGAAAAATCCCTGACGAGCTGGGGAACTTGACCAACTTGGTGAGCTTGGATCTTTATTTGAACAAATTAAATGGTCCCATACCAGACACCTTGAGCAAGCTTCAGAAATTGCGTTTTCTGCGTCTCAATAATAACAGCTTGTCTGGAAGTATTCCTGTCTCTTTGACTAATGTTGCTTCACTGCAAGTCCTTGATCTTTCAAACAACCAGTTGAAAGGAGACATTCCAGTTAATGGTTCATTTTCATTGTTTACCCCCATCAGTTTTAATAATAATCCTGGATTGAGACAACCAAAGGTCACTCCAAGTCCTCCGTCTTCTCTAACGCCATCAGCAAGTTCAGGTAACAGTGACACTGCAGCTATTGCTGGTGGAGTTGCTGCTGGTGCTGCTTTGTTGTTTGCAGCCCCTGCAATTGCTCTTGCATATTGGCGAAGAAGGAAACCACAGGAATATTTCTTTGATGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGCCAGCTCAAACGTTTTTCACTGCGTGAACTGCAGGTCGCAACAGATAACTTTAGTAACAAAAACATTCTAGGTAGAGGTGGTTTTGGGAAGGTTTATAAAGGACGCTTAGCTGATGGTTCTCTAGTAGCAGTGAAAAGATTGAAAGAAGAACGCACCCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTGGAAATGATTAGCTTGGCTGTGCATCGGAATTTACTTCGGCTGCGTGGTTTTTGCATGACACCAACAGAAAGGTTGCTTGTGTATCCTTTCATGGTTAATGGAAGTGTAGCATCATGTTTAAGAGAGCGTCCAGAAACACAACCGCCACTTGACTGGCCAATACGGAAGCGTATTGCTTTGGGAGCTGCTAGGGGACTTGCTTATCTGCATGATCATTGTGACCCAAAGATCATTCATCGTGATGTAAAAGCAGCAAATATATTGTTGGATGAGGAGTTTGAAGCAGTTGTTGGAGACTTTGGTCTTGCAAAACTCATGGATTACAAAGATACTCATGTTACTACTGCTGTCCGTGGTACAATTGGGCATATAGCACCAGAGTACCTCTCTACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTTATGCTTCTTGAACTAATAACTGGTCAGAGGGCTTTTGATCTTGCACGACTTGCCAATGATGATGATGTCATGTTGCTTGATTGGGTGAAAGGACTTTTGAAAGACAAGAGATTGGAAACTCTGGTGGATGCTGATTTACAGGGAAATTATATTGACGAGGAGGTTGAGCAACTCATCCAGGTAGCATTACTATGCACACAAGGCACCCCTTTGGAAAGACCCAGAATGTCTGAGGTAGTCCGAATGCTCGAAGGCGATGGCCTGGCAGAGAAGTGGGAGCAATGGCAGAAAGAGGAGATGTTCCGGCAAGACTTCAACTATGTCCACCACCCCAATGCTAATTGGATAGTAGACTCAACCTCACACATCCCTCCAGATGAGCTATCAGGTCCTAGATGA 1767 0.4409 MRKTGDALNALKTSVADPNNVLQSWDPTLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKIPDELGNLTNLVSLDLYLNKLNGPIPDTLSKLQKLRFLRLNNNSLSGSIPVSLTNVASLQVLDLSNNQLKGDIPVNGSFSLFTPISFNNNPGLRQPKVTPSPPSSLTPSASSGNSDTAAIAGGVAAGAALLFAAPAIALAYWRRRKPQEYFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERPETQPPLDWPIRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDADLQGNYIDEEVEQLIQVALLCTQGTPLERPRMSEVVRMLEGDGLAEKWEQWQKEEMFRQDFNYVHHPNANWIVDSTSHIPPDELSGPR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0211 588 SMART serkin_6 265 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0211 588 Pfam Protein kinase domain 266 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0211 588 Gene3D Transferase(Phosphotransferase) domain 1 342 559 - -
Prci11g0211 588 MobiDBLite consensus disorder prediction 175 196 - -
Prci11g0211 588 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Prci11g0211 588 SMART LRR_typ_2 115 138 IPR003591 -
Prci11g0211 588 SMART LRR_typ_2 67 91 IPR003591 -
Prci11g0211 588 SMART LRR_typ_2 139 164 IPR003591 -
Prci11g0211 588 FunFam Somatic embryogenesis receptor-like kinase 1 342 559 - -
Prci11g0211 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 388 400 IPR008271 GO:0004672|GO:0006468
Prci11g0211 588 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 550 - -
Prci11g0211 588 ProSiteProfiles Protein kinase domain profile. 265 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0211 588 SUPERFAMILY Protein kinase-like (PK-like) 244 540 IPR011009 -
Prci11g0211 588 Gene3D Phosphorylase Kinase; domain 1 234 341 - -
Prci11g0211 588 Gene3D Ribonuclease Inhibitor 2 184 IPR032675 -
Prci11g0211 588 Pfam Leucine rich repeat N-terminal domain 5 41 IPR013210 -
Prci11g0211 588 FunFam Somatic embryogenesis receptor kinase 1 234 341 - -
Prci11g0211 588 Pfam Leucine Rich Repeat 69 91 IPR001611 GO:0005515
Prci11g0211 588 FunFam Somatic embryogenesis receptor kinase 1 1 187 - -
Prci11g0211 588 SUPERFAMILY L domain-like 6 169 - -
Prci11g0211 588 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0211 Prci-Chr11 2497627 2510042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0211 5 588 Receptor kinase-like Gene Family AT4G33430 78.864 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci11g0211 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0211 K13416 - rcu:8277786 1021.54