Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0208 ATGCAAGCTCGTTTGGGTTCCCGATCTACTGTTTATTACTCGGATATTGCTAGTTTGTGTAGCTTAAATATGAGTCACCGTGTTAGTGACAAGGATATGGAAAAGGTGATGGATGAGGAAATCAAAAGTGGGCATTCTTCCAATAGACATGACGACAACACTTTGCCATATGTTCACAAGGTGGGAGTTCCTCCTAAGCAAAATGTTCTCGAAGAGATCAAATATACTGCCATGGAAACTTTTTTTGCAGACAAGCCCTTAAGCCACTTTAAAGGCCAACCTGCATCCAGAAAGTTTGTTCTTGGCCTGCAAGCAATTTTCCCAATCCTTGAATGGGGAAGAGGTTACAATCTTACTAAATTTAAAGGGGATTTTGTTGCTGGACTTACTGTTTCAAGTCTCTGTATTCCTCAGGCAATTGCATATGCAAAGCTTTCGAATTTGAAGCCTCAGTATGGACTCTACTCAGCCTTTGTTTCTCCAATTGTGTATGCTATAATGGGAAGCTCAAGAGACATGGCTTTGGGACCAGTGGCTGTGGTATGCCTTTTGCTTGGGACAATGATGACAAAAGAGAATAATGACTATGAAAGTTTCGACTATGTTCGTCTTGCATTTACTGCCACCTTTTGGGCTGGAATCACTCAAATGGCTTTTGGAATTCTCAGGCTCGGATTCTTGATCGAGTACTTATCTCATGCTGCCATTGTGGGATTCATGTCTGGAGCTGCTATTGTTATAGCCATGCAGCAGCTTAAAGGATTTCTTGGCATACGAAAATTCACCAAGAAGAGTGACATTATTAATGTCATGCGCGCAGTTTGGACTAACGTAGAACACGGGTGGCATTGGCAAACGATACTCATTGGAGTAGCATTCTTGGCTTTTCTCGTTATAATAAAGAATACGGCTAAAAAGAACAAGAAACTATTTTGGGTGGCTACACTTGCTCCTTTGACGTCTGTTATAGTGTCCACCTTTTTTGTCTACATAACCCGAGCTGACAAGAAAGGTGTTGCAATTGTGAAAGACATAGATAAGGGAGTGAATCCAATATCTGTTGGTGATATTTTTTTCAGCGGAAAATATCTTGGTGCTGGTATTCAGATTGGTGTAGTAGTTGGTCTGATTGCACTCACGGAAGCAGTGGCAATAGCGAAAACATTCGCTTCCAGGAAAGATTATCCCTTAGATGGTAACAAAGAAATGATTGCATTGGGAACAATGAGTGTTGTTGGTTCATTCACATCTTGTTTTTTAGTTTCAGGATCTTTTTCACGTTCAGCAGTGAACAGCACGACTGGCTGTAAAACTGCTGTATCAAACATTGTTACAGGCATTGTGGTGTTATTAACCTTGCTGTTCATCACACCGTTATTTAAGTACACTCCAAATGCAGTGCTTGCTTCTATCATAATATCTGCTGTGCTAAGCCTTATTGACATTGAAGAATTCGTTCATTTATGGAAGATAGACAAGTTTGATTTTGTAGCTGCCATGGGAGCTTTCTTTGGTGTGGTTTTCAAATCTGTTGAGATTGGCCTTCTTATTGCGGTGATCTTATCATTTGCCAAAATCCTTTTACAAGTTACAAGGCCAAAGACAATGGTACTTGGGAAGATTCCAGGGACGAATGTTTACAGGAGCATCTTTCAATACCCAAATGCTAAACAGATTCCTCAAATGCTGATTATTAGAGTTGATTCTGCAATCTATTTCTCTAACTCCAGCTATATCAGAGACAGAATTCTGCGATGGCAGGAAGATGAAGATGAGCAAAGGAAAGAAAGTGGCTTTCCCAAAATAGAATATGTGATTGTTGAGATGTCACCCGTTACTGACATTGACACTAGTGGCATCCATGCCTTTGAAGAATTACACAAGAGCCTCAAGAAAAGAGGATTACAGCTTCTGGTGGCAAATCCTGGGCCAGTTGTAATGGAGAAGCTGCATGCGTCCAAGTTGGCAGAGACTATTGGGGAAGACAAGATATTTCTATCAGTGGCTGATGCTGTTGCAACTTTCGGTTCAAAGGCTGATCATGAAGTTTGA 2052 0.4079 MQARLGSRSTVYYSDIASLCSLNMSHRVSDKDMEKVMDEEIKSGHSSNRHDDNTLPYVHKVGVPPKQNVLEEIKYTAMETFFADKPLSHFKGQPASRKFVLGLQAIFPILEWGRGYNLTKFKGDFVAGLTVSSLCIPQAIAYAKLSNLKPQYGLYSAFVSPIVYAIMGSSRDMALGPVAVVCLLLGTMMTKENNDYESFDYVRLAFTATFWAGITQMAFGILRLGFLIEYLSHAAIVGFMSGAAIVIAMQQLKGFLGIRKFTKKSDIINVMRAVWTNVEHGWHWQTILIGVAFLAFLVIIKNTAKKNKKLFWVATLAPLTSVIVSTFFVYITRADKKGVAIVKDIDKGVNPISVGDIFFSGKYLGAGIQIGVVVGLIALTEAVAIAKTFASRKDYPLDGNKEMIALGTMSVVGSFTSCFLVSGSFSRSAVNSTTGCKTAVSNIVTGIVVLLTLLFITPLFKYTPNAVLASIIISAVLSLIDIEEFVHLWKIDKFDFVAAMGAFFGVVFKSVEIGLLIAVILSFAKILLQVTRPKTMVLGKIPGTNVYRSIFQYPNAKQIPQMLIIRVDSAIYFSNSSYIRDRILRWQEDEDEQRKESGFPKIEYVIVEMSPVTDIDTSGIHAFEELHKSLKKRGLQLLVANPGPVVMEKLHASKLAETIGEDKIFLSVADAVATFGSKADHEV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0208 683 CDD STAS_SulP_like_sulfate_transporter 553 668 - -
Prci11g0208 683 Pfam STAS domain 553 671 IPR002645 -
Prci11g0208 683 NCBIfam sulfate permease 108 671 IPR001902 GO:0016020|GO:0055085
Prci11g0208 683 FunFam Sulfate transporter 31 532 678 - -
Prci11g0208 683 Pfam Sulfate permease family 121 500 IPR011547 GO:0016020
Prci11g0208 683 PANTHER SULFATE TRANSPORTER 73 674 IPR001902 GO:0016020|GO:0055085
Prci11g0208 683 SUPERFAMILY SpoIIaa-like 554 676 IPR036513 -
Prci11g0208 683 ProSitePatterns SLC26A transporters signature. 150 171 IPR018045 GO:0008271|GO:0008272
Prci11g0208 683 Gene3D STAS domain 532 678 IPR036513 -
Prci11g0208 683 ProSiteProfiles STAS domain profile. 552 675 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0208 Prci-Chr11 2459472 2465159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0208 59 682 Inorganic Solute Cotransporters AT4G08620 65.024 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0208 K17470 - gmx:100784124 927.932