Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0201 ATGAGTCACCGTGTTAGCGACGATGTTGTGGACAGGGTCACAGAGGAAATCCGAAGTGGGCATTCTTCTCGTCGACATGTGCCATATATTTACAAGGTGGGAGCTCCTCCTAAGCAAAGTCTTCTCAAAGAGATCAAAGATTCTCTGATGGAAACTTTCTTTTCAGACAAGCCCTTAAGCCACTTCAAGGACCAACCTGCATCCAGAAAATTTGTTCTTGGCCTGCAAGCAGTTTTCCCAATTCTTGAATGGGCAAGAGGCTATAATCTTAGTAAATTTAAAGGGGATCTCGTTGGTGGACTTACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATGCAAAGCTGGCAAATTTGAAACCTCAATATGGACTGTACACCAGCTTTGTGGCTCCTCTTGTCTATGCTTTCATGGGAAGCTCCAGAGATATAGCCATAGGACCAGTGGCTGTGGTATCCCTTTTACTTGGGACCATGCTGACGGATGAGATTAGTAACTACAAAAGTCATGACTATCTTCGTCTTGCATTTACTGCCACCTTTTTTGCAGGAATCACTCAACTGGCACTTGGAGTTCTCAGGCTTGGTTTCTTGATTGACTTCTTATCTCACGCTGCCATTGTGGGCTTCATGGCTGGAGCTGCTGTTACTATAGCCTTGCAGCAGCTTAAAGGATTGCTTGGCATAAAAAGCTTCACCAAGAAGACTGACATAATTTCTGTCATGCGCTCAGTTTGGACAAACGTGCACCATGGGTGGAATTGGCAGACAATAGTCATTGGATTAGCATTCTTGGCTTTCCTCCTTGCAACTAAGTATCTGGCTAAAAAGAAGAAGAAACTCTTTTGGGTGTCTGCACTTGCTCCTTTGGTGTCTGTTATACTGTCCACCTTTTTTGTCTGCATTACTCGTGCTGACAAGGAAGGTGTTGCAATTGTGACCCACATAGAAAAGGGAGTGAATCCATCATCTGTTAGTGAAATCTTTTTCAGCGGAAAATATCTTGGCCCTGGTATTCGGATTGGTGTGGTATCTGGTTTGATTGCACTCACGGAAGCTGTAGCAATTGGGAGAACGTTTGCTGCTATGAAAGATTATCCTTTGGATGGTAACAAAGAAATGGTGGCAATGGGAACAATGAATATTGTTGGTTCCCTCACATCTTGCTATGTAGCAACAGGATCTTTTTCACGCTCAGCAGTGAACTACATGGCTGGCTGTCAAACTGCTGTATCAAACATCGTTATGTCCATTGTTGTGTTATTAACCTTGGTGTTCATTACACCACTGTTTAAGTACACCCCAAATGCAGTGCTTGCTTCTATTATAATAGCGGCTGTGGTAAGCCTTGTTGACATTGATGCGGTCATTCTGCTATGGAAGATTGACAAATTTGATTTTCTAGCCTGCATGGGAGCCTTCTTTGGTGTGATCTTCAAAAATGTTGAGATTGGCCTTCTTATTGCGGTGGCCATATCATTTGCTAAAATCCTTTTACAAGTGACAAGGCCGAGGACTGTGGTACTTGGGAAACTTCCAGGGACCACTGTGTACAGGAACATCAATCAGTACCCAAATGCTGCACAAATTCCCCGAATACTGATTATTAGAGTTGACTCTGCCATCTACTTCTCAAACTCCAACTATATCAAGGACAGAATTCTGAGATGGCTGCAAGATGAAGATGAGCGAAGGAAAGGAAGTTGTTTACCGACAATACAATATGTGCTTATTGAAATGTCACCTGTTACTGACATTGACACTAGCGGCATCCATGCCTTTGAAGATTTGTACAAGAGCCTTCTGAAGAGAGAGGTCCAGCTTCTGTTGGCAAATCCTGGGCCAATTGTAATGGAGAAGCTCTATGAATCCGAGTTAGCGAACATGATTGGGGAAGACAAGATATTTCTATCAGTGGCTGATGCTGTTGCAACTTTTCGTTCAAAAGCTGAAGAACAAGTATGA 1968 0.4309 MSHRVSDDVVDRVTEEIRSGHSSRRHVPYIYKVGAPPKQSLLKEIKDSLMETFFSDKPLSHFKDQPASRKFVLGLQAVFPILEWARGYNLSKFKGDLVGGLTIASLCIPQDIAYAKLANLKPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTMLTDEISNYKSHDYLRLAFTATFFAGITQLALGVLRLGFLIDFLSHAAIVGFMAGAAVTIALQQLKGLLGIKSFTKKTDIISVMRSVWTNVHHGWNWQTIVIGLAFLAFLLATKYLAKKKKKLFWVSALAPLVSVILSTFFVCITRADKEGVAIVTHIEKGVNPSSVSEIFFSGKYLGPGIRIGVVSGLIALTEAVAIGRTFAAMKDYPLDGNKEMVAMGTMNIVGSLTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVLLTLVFITPLFKYTPNAVLASIIIAAVVSLVDIDAVILLWKIDKFDFLACMGAFFGVIFKNVEIGLLIAVAISFAKILLQVTRPRTVVLGKLPGTTVYRNINQYPNAAQIPRILIIRVDSAIYFSNSNYIKDRILRWLQDEDERRKGSCLPTIQYVLIEMSPVTDIDTSGIHAFEDLYKSLLKREVQLLLANPGPIVMEKLYESELANMIGEDKIFLSVADAVATFRSKAEEQV 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0201 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Prci11g0201 655 Pfam STAS domain 525 643 IPR002645 -
Prci11g0201 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Prci11g0201 655 PANTHER SULFATE TRANSPORTER 40 647 IPR001902 GO:0016020|GO:0055085
Prci11g0201 655 SUPERFAMILY SpoIIaa-like 526 648 IPR036513 -
Prci11g0201 655 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Prci11g0201 655 FunFam Sulfate transporter 31 504 650 - -
Prci11g0201 655 Pfam Sulfate permease family 93 472 IPR011547 GO:0016020
Prci11g0201 655 NCBIfam sulfate permease 80 643 IPR001902 GO:0016020|GO:0055085
Prci11g0201 655 Gene3D STAS domain 504 651 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0201 Prci-Chr11 2402768 2407818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0201 2 655 Inorganic Solute Cotransporters AT1G22150 69.466 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0201 K17470 - gmx:100784124 986.482