Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0200 ATGGAAGTTTCATCCTTGAGCTCAACCTTATTTCCCAATAGGCCCTCTCATGGCTTTAATCCTTTCTCAAAAAAGTGGCAAAGCCAAAGGCTGATTCCGGCTCAATATGTTTCATGCAAAGCAAGAAAGCTAGCTATTGAGGTCAAAGAGATAACCACTGAAAACTTTTACAAGATGCTATCGTTGAATCCGAAGAGTGCAACCAATGAAGAAATAAAGAAGGCGTATAGGTCGATGGCACTTCAGTACCACCCAGACGTGTGCCTAGATCCTTTAAGGAAGGAGAAGTGTACGAGGATGTTTGTGCAGCTCCATGCAGCTTACGAGACATTATCGGACCCGGTACTCCGACAAGAGTATGATTATGAACTCGGCTTGATTACAAGCAAGAGGAATAATAGTAAGAATGTTAATGGTGGAGGTGAAAGATGGAGAAGAAGGTGGGAACAGCAAGTGGTTGAGTTGAAGAGAAGGTCTGATACAAGGATGGCTCAAAAGGAAAATTCATCATGGGGTAGTAGAATTAGGGCTCAAAATATGAAAAATGATAAATAA 555 0.4162 MEVSSLSSTLFPNRPSHGFNPFSKKWQSQRLIPAQYVSCKARKLAIEVKEITTENFYKMLSLNPKSATNEEIKKAYRSMALQYHPDVCLDPLRKEKCTRMFVQLHAAYETLSDPVLRQEYDYELGLITSKRNNSKNVNGGGERWRRRWEQQVVELKRRSDTRMAQKENSSWGSRIRAQNMKNDK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0200 184 Gene3D DnaJ domain 43 152 IPR036869 -
Prci11g0200 184 SMART dnaj_3 54 116 IPR001623 -
Prci11g0200 184 CDD DnaJ 55 113 IPR001623 -
Prci11g0200 184 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 24 182 - -
Prci11g0200 184 PRINTS DnaJ domain signature 76 91 IPR001623 -
Prci11g0200 184 PRINTS DnaJ domain signature 58 76 IPR001623 -
Prci11g0200 184 PRINTS DnaJ domain signature 96 116 IPR001623 -
Prci11g0200 184 MobiDBLite consensus disorder prediction 156 184 - -
Prci11g0200 184 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Prci11g0200 184 SUPERFAMILY Chaperone J-domain 49 124 IPR036869 -
Prci11g0200 184 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Prci11g0200 184 Pfam DnaJ domain 55 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0200 Prci-Chr11 2398462 2399255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0200 57 121 C2H2 Transcription Factor Family AT1G74250 40.299 5.27e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0200 - - gmx:100783590 166.777