Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0194 ATGGGGTTTCCACTTCTTGTTCTTGAGCAAATTCTCTTTGCTGTTCTTCTTGCTGCACAGTCGAACAAGCTTGTCATGGCTCAAGATGATCTTAATGGCCTGAAGGCCACTTTCAATGACCCTTTTCTGAATGATAACTGGATTGGTTTTCCCTGCAATGAGACTGAAACGTCAAGATGGTTTGGGATTCAGTGTACCGATGGTCGAGTCATCGGTATAGTTCTGGAAGGTATGGGGCTAACCGGGAAAGTTGATGTCAAATCATTCTTCAGCCTTACAGAGTTGTCTATTCTGAGCTTCAAGAACAATTCCTTGAAGGGAAATGTGATGGATTTCTCCAACAATCATCAGTTGATGTACATTGACCTGTCAGGCAATGAGTTTGAAGGGTCAATACCAAGATCTCTTCTGAATCTTAGCCTCTTGGAAACGTTGTTACTGCAAGATAATAAGCTCACAGGTCCAATTCCAGAGTTCAATCAACCAAGTTTGAAGATGATCAATGTGTCAGGCAATGATCTTCATGGCAGAATCAGAATAACCCAGACTTTTCGATCATTGGGGCCTAATTCATTTTCTGGCAACCCCAGATCATGTGGTCCTCCTCTCAATTCCTTGAGCTCTAGCTTGAAATCTTCCATTCCAGGACCAGCAAATGACTCCGAAAACGATGAGGCCCAGAACCAGGATGGATCTTCAAATAAAGATAACACATCCACTATCCTAATCATTGTCAATGTGGTGCTTCTGTTTGCAATAATCTTTTTAGCTTTTCTTTACTATAAGACAGTCAAGAAGCTCAACAAAATTATGAAGCAGCAGATTCCCATTAATAAAGATGTGGCGGAGAGCACTGTTGATAAGGTCGAAATGAGAGATCGTCACAGTCCAGCAGTGATGGCAGTGGAAGAGAAGAAGGAGCTTATATTCTTTACGGATGAACCAAAGTTTCAAATGAATGAGCTCTTGAAAGCTTCTGCAGAGGCACTGGGTCAGGGAATCATGGGGAACAGTTACAAGGCGATGCTGAATGGAGGAGCTTCCATTGTGGTGAAGAGGCTGAGGGACTTGAAGCCAATGACAAGAGAGGACTATGCAAAGCAATTGCATGGAATTGCTGATCTGAAGCACCCAAATTTGTTGCCTTTGCTTGCTTACTACAATTCCAGAGATGAGAGGTTGCTGCTCTATAGATATGCTGAGAGGGGAAATCTTTTCTTCAGGCTTCACGGAAACAGAACTGGAAACCGGATTCCATTCTCATGGAGCTCAAGATTATCAGTGGCAAAAGGGGTTGCCCGAGGATTAACTTACCTTCATCTCAATGCCAAGCCCAACAACACCATGGCTCCCCATGGAAACTTGAAGTCCTCAAATGTCCTGCTAGATGAAAACGACACCGTTCTCGTCTCTGACTACGGACTTTCCTCCCTCGTAGCACAACCCATCGCAGCTCAACGCATGGTAGTTTACAAATCACCCGAATATGGGTACGCAAGAAAAGTATCAAAGCAATCTGACGTCTGGAGCTATGGAAGCCTTCTCACAGAACTTTTAACAGGCAGGTTATCTGTGTGTTCTGCCCCACCTGGGATTAACGGGTCGGATCTCTGTAGCTGGGTCCACAGAGCGGTGAGGGAAGAATGGACGGCGGAGATATTCGACAAGGAAATTTCTGTGCAGAGAAGTGCTCTTCCTGGGATGCTGAGATTGCTTCAGATCGCGATGCGTTGCACCGATAGGTTCCCTGAGAATCGGCCAGATATGAGAGAGGTGGTGAGAGAAGTGGAGAAGATTGAAGCTCCATTGATGTCGGAAGATGAAGAAGATGTATCTGGGGATAGGTCTATCACAGATGATTCTCTCTACTCAACCAGTACTGCCTCAGGGATTCTTGGAGATGACAGGTAG 1911 0.449 MGFPLLVLEQILFAVLLAAQSNKLVMAQDDLNGLKATFNDPFLNDNWIGFPCNETETSRWFGIQCTDGRVIGIVLEGMGLTGKVDVKSFFSLTELSILSFKNNSLKGNVMDFSNNHQLMYIDLSGNEFEGSIPRSLLNLSLLETLLLQDNKLTGPIPEFNQPSLKMINVSGNDLHGRIRITQTFRSLGPNSFSGNPRSCGPPLNSLSSSLKSSIPGPANDSENDEAQNQDGSSNKDNTSTILIIVNVVLLFAIIFLAFLYYKTVKKLNKIMKQQIPINKDVAESTVDKVEMRDRHSPAVMAVEEKKELIFFTDEPKFQMNELLKASAEALGQGIMGNSYKAMLNGGASIVVKRLRDLKPMTREDYAKQLHGIADLKHPNLLPLLAYYNSRDERLLLYRYAERGNLFFRLHGNRTGNRIPFSWSSRLSVAKGVARGLTYLHLNAKPNNTMAPHGNLKSSNVLLDENDTVLVSDYGLSSLVAQPIAAQRMVVYKSPEYGYARKVSKQSDVWSYGSLLTELLTGRLSVCSAPPGINGSDLCSWVHRAVREEWTAEIFDKEISVQRSALPGMLRLLQIAMRCTDRFPENRPDMREVVREVEKIEAPLMSEDEEDVSGDRSITDDSLYSTSTASGILGDDR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0194 636 Gene3D Ribonuclease Inhibitor 27 208 IPR032675 -
Prci11g0194 636 ProSiteProfiles Protein kinase domain profile. 324 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0194 636 MobiDBLite consensus disorder prediction 600 636 - -
Prci11g0194 636 Gene3D Transferase(Phosphotransferase) domain 1 401 620 - -
Prci11g0194 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 600 IPR046959 -
Prci11g0194 636 MobiDBLite consensus disorder prediction 187 234 - -
Prci11g0194 636 SMART serkin_6 324 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0194 636 Gene3D Phosphorylase Kinase; domain 1 290 399 - -
Prci11g0194 636 Pfam Protein tyrosine and serine/threonine kinase 328 595 IPR001245 GO:0004672|GO:0006468
Prci11g0194 636 SUPERFAMILY L domain-like 51 203 - -
Prci11g0194 636 SUPERFAMILY Protein kinase-like (PK-like) 328 602 IPR011009 -
Prci11g0194 636 MobiDBLite consensus disorder prediction 617 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0194 Prci-Chr11 2324504 2327144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0194 60 621 Receptor kinase-like Gene Family AT5G58300 35.690 4.93e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci11g0194 PK_Tyr_Ser-Thr 4.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0194 - - pcin:129284917 1226.85