Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0138 ATGGCGGAGCAAGCTTCTTACGGTGTGGGTCCTCGATTAGATTTTCAGCAATTGCAATTTGAAGCCCAGCATCGGTGGTTGCGGCCTGCTGAAATATGTGAAATTCTCCGCAACTATCAGATGTTTCAAATTACTTCAGAACCTCCAAACAGGCCCCCAAGTGGTTCACTTTTTCTGTTTGATCGGAAGGTGTTGAGATATTTTAGAAAGGATGGACATAATTGGAGGAAGAAAAGAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATATGTTACATTGCTACTATGCCCATGGGGAAGAAAATGAAAGTTTTCAGAGGCGTAGCTATTGGATGCTTGAACAGGACATGATGCATATAGTTTTTGTCCACTACTTGGAAGTAAAGGGTAACAAAACAAATATTGTAGGAAATACTGATAGCGATGAGGTTACATCAGGAAATAGCAGATCTCCATCCCCATCTCCATCATCTGGTTTTCCTATTAATTATGGTAATATGCCTTCAAGAAGCACAGATGCCATGAGCCCAACTAGCACTTTATCTTCCTTATGTGAAGATGCTGATTCAGGTGATCATGGACAGCCATCAGTTTCTGGGTTGAATTATATCCCGCTTGTTGATGGAGATAAAACTGGAGGAAGCAATGCGTCCTTCATCGAGGGCCAAAATGTCCATGGCATGGCCTCCTGGGACAATGTCTTGGACCAATGTACTGCCGGATTGCATGCTGATCCTAATCTTGCATCATTTCCTTCTGTCCCACCCTATTCAGCTGGGAACATTCTTGAGCAAGAACCTACTCTGGGTGATCTTTTAGCAAGTAAGGGTACCCTAGCTGAGGAGGCAGGGAAATCTCACTCTTTTCAATCAAATTGGCAGATTCCTTTTGAAGACAATTCAGGACAGTTGCATAAATGGCCGATAGCCCAATTGTTGAGTTCTGAATACGGATCTGATTTTACCACTGGTTTACTAGAGCATGAATCTCATGATGCAGGACCTGAAATTGCTTCTGACCTGTTTACTTTTGATGGCCAGTCAAGAGAACAACCTTTGCAGGAAAACTTTTCAGAACAGCATGCAGATGCGCAATATCAATTTTCTCTGAAACCTTATTCTGAGAATGAGAATGCATTCACTATGAAACGCCCATTATTAGAGGGAGATGATAGCCTGAAGAAAGTTGACAGCTTTTCTCGATGGGTTAGTAAAGAACTTCCAGAGATGGATGATCTACGTATGCAATCCTCACCTGGTATTTCATGGAGCACGGATGAACATGGGCAAGTTATAGATGATTCTTCATTGAGTCCCTCCCTCTCTCATGACCAGCTGTTCAGCATATATGATTTTTCACCTAAATGGGCTGATGCTGATTCTGAAACAGAGGTTTTTATCATTGGAACATTTTTGAAGAATCAGCCAGTGGTGGCAAGCTACAACTGGTCCTGTATGTTTGGTGAAGTTGAAGTTCCTGCTGAGATTTTAGCTAATGGAGTTTTGTGTTGTCTTGCTCCACCTCTTAAGGCTGGAAGGTTTCCCTTCTATGTAACGTGTTCCAATAGGTTAGCTTGCAGTGAAGTAAGGGAATTTGATTACAGAGAGGGCTTTGCTAAAGATGTAGAAGTTGAAGTTATTTACAGCAGTTCATTTGACATGCTGCTTTACTTGCGATTGGAAGCTTTACTTTCTTTAAAATCAGTTCACCCTCCAAATGAGAAGTCATTTGATAGTGATACAGAGAAAAGAAGCATGATTTATAAGCTTGTTTCATTGAAGGAAGAGGAGGAGTATTTAAATAAGGAAGGGACAACTTCAGTTATGGACTTGTCCCAGCAGAAGGTAAAGGAACAGCAATTTTTCAGACAAGTGAAAGAGAAGCTGTACTCATGGCTACTTCACAAAGTAGCTGAAGATGGTAAAGGGCCAAATGTATTGGATGAGGAGGGACAGGGTGTGCTACATCTATCAGCTGCTCTTGGTTATGATTGGGCCATAGCACCAATTATTATTTCTGGAGTTAATATCAATTTCCGGGACATAAATGGATGGACAGCTCTGCATTGGGCTGCCTCTTGTGGCAGAGAACGGACAGTTGCTCTCCTTGTCATCATGGGTGCAAACCCTGGATTAGTGACCGACCCATGTCCAGAATTTCCGTTGGGTAGAACACCTGCAGATCTTGCTTCTAGTAATGGACACAAGGGAATTTCAGGCTTTGTTGCAGAGTCTTCATTAACTAGCCACCTTGCGTCTCTCACAATGGATGACCAAAAGGGAGATGGTGGTCAAGAAGTTTCAGGAATGAAAGCAGTACATACTGTTTCAGAACGTTCTGTAACACCTTTGTTTTATGGTGATATATCAGATGCCCTATGCCTTAAGGATTCTCTCACCGCTGTACATAATGCTACACAAGCAGCTGACCGTATACATCAAGTATTTAGAATGCAGTCATTCCAAAGGAAGCAGTTAACTGAGTATGAGGATGATGAGTTTGGATTGTCAGATCCGCGAGCTCTCTCTCTTCTAGCTAGAAAGGCAAACAAGGCCAGACAGGGAGATGGGTTAGCCCATGCTGCGGCAACACAAATACAAAAGAAGTTTCGTGGCTGGAAGAAGAGAAAAGAGTTCCTAATAATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTAAGAGGGCACCAGGTAAGGAAGCAGTACAAGTCAATTATCTGGTCCGTAGGAATCCTGGAGAAGGTCATATTGCGATGGAGACGCAAGGGCAGTGGCTTACGTGGATTTCGACCTGATGCTGCTAACAAGGAAACCAACCAACCAAGTGAACCTTTGAAAGAGGATGAGTATGATTTTCTCAAGGAAGGTAGGAAACAAAGTGAGGAAAGGTTCCAGAAGGCCCTTTCGAGGGTAAAGTCCATGGTTCAGTATCCCGAAGCTCGGGCTCAATATCGACGGCTGCTAAACGTTGTCGAGGACTTCCGTCAAACTAAGGCATGCAATATGGACTTGAGCAATTCGGAAGAGACTGTTGATGGTGTGGAGCAGCTTATTGATATTGACATGCTTTTAGATGATAATTTCATACCTATAGCATTTGATTGA 3126 0.4267 MAEQASYGVGPRLDFQQLQFEAQHRWLRPAEICEILRNYQMFQITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHEKLKVGSVDMLHCYYAHGEENESFQRRSYWMLEQDMMHIVFVHYLEVKGNKTNIVGNTDSDEVTSGNSRSPSPSPSSGFPINYGNMPSRSTDAMSPTSTLSSLCEDADSGDHGQPSVSGLNYIPLVDGDKTGGSNASFIEGQNVHGMASWDNVLDQCTAGLHADPNLASFPSVPPYSAGNILEQEPTLGDLLASKGTLAEEAGKSHSFQSNWQIPFEDNSGQLHKWPIAQLLSSEYGSDFTTGLLEHESHDAGPEIASDLFTFDGQSREQPLQENFSEQHADAQYQFSLKPYSENENAFTMKRPLLEGDDSLKKVDSFSRWVSKELPEMDDLRMQSSPGISWSTDEHGQVIDDSSLSPSLSHDQLFSIYDFSPKWADADSETEVFIIGTFLKNQPVVASYNWSCMFGEVEVPAEILANGVLCCLAPPLKAGRFPFYVTCSNRLACSEVREFDYREGFAKDVEVEVIYSSSFDMLLYLRLEALLSLKSVHPPNEKSFDSDTEKRSMIYKLVSLKEEEEYLNKEGTTSVMDLSQQKVKEQQFFRQVKEKLYSWLLHKVAEDGKGPNVLDEEGQGVLHLSAALGYDWAIAPIIISGVNINFRDINGWTALHWAASCGRERTVALLVIMGANPGLVTDPCPEFPLGRTPADLASSNGHKGISGFVAESSLTSHLASLTMDDQKGDGGQEVSGMKAVHTVSERSVTPLFYGDISDALCLKDSLTAVHNATQAADRIHQVFRMQSFQRKQLTEYEDDEFGLSDPRALSLLARKANKARQGDGLAHAAATQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKSIIWSVGILEKVILRWRRKGSGLRGFRPDAANKETNQPSEPLKEDEYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKACNMDLSNSEETVDGVEQLIDIDMLLDDNFIPIAFD 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0138 1041 ProSiteProfiles Ankyrin repeat region circular profile. 690 716 - -
Prci11g0138 1041 FunFam Calmodulin-binding transcription activator 2 865 913 - -
Prci11g0138 1041 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1004 - -
Prci11g0138 1041 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Prci11g0138 1041 SUPERFAMILY E set domains 456 542 IPR014756 -
Prci11g0138 1041 Pfam IPT/TIG domain 456 534 IPR002909 -
Prci11g0138 1041 Pfam IQ calmodulin-binding motif 891 910 IPR000048 GO:0005515
Prci11g0138 1041 Pfam IQ calmodulin-binding motif 867 886 IPR000048 GO:0005515
Prci11g0138 1041 Gene3D - 866 913 - -
Prci11g0138 1041 SUPERFAMILY Ankyrin repeat 641 747 IPR036770 -
Prci11g0138 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 858 916 IPR027417 -
Prci11g0138 1041 SMART CG_1_2 18 136 IPR005559 GO:0003677
Prci11g0138 1041 SMART ANK_2a 690 719 IPR002110 GO:0005515
Prci11g0138 1041 SMART ANK_2a 729 758 IPR002110 GO:0005515
Prci11g0138 1041 Gene3D Immunoglobulins 449 544 IPR013783 -
Prci11g0138 1041 MobiDBLite consensus disorder prediction 144 207 - -
Prci11g0138 1041 FunFam Calmodulin-binding transcription activator 2 449 545 - -
Prci11g0138 1041 Pfam Ankyrin repeats (3 copies) 639 718 IPR002110 GO:0005515
Prci11g0138 1041 ProSiteProfiles IQ motif profile. 866 895 IPR000048 GO:0005515
Prci11g0138 1041 Gene3D - 615 769 IPR036770 -
Prci11g0138 1041 SMART iq_5 865 887 IPR000048 GO:0005515
Prci11g0138 1041 SMART iq_5 888 910 IPR000048 GO:0005515
Prci11g0138 1041 MobiDBLite consensus disorder prediction 144 193 - -
Prci11g0138 1041 ProSiteProfiles IQ motif profile. 889 913 IPR000048 GO:0005515
Prci11g0138 1041 ProSiteProfiles Ankyrin repeat profile. 690 722 IPR002110 GO:0005515
Prci11g0138 1041 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0138 Prci-Chr11 1915091 1926004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0138 1 1023 CAMTA Transcription Factor Family AT5G64220 53.450 0.0 1042
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Prci11g0138 CG-1 3.8e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0138 K21596 - gmx:100795682 1457.58