Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0135 ATGGATAACCTTTGCTGCTTCAACTCTGTCACTCAGGTTGTTGGAGGACGTTCGTCAAGTAGCTCTGGCAAGGGCAGAAGCCATCAGAGTCATGTCAAGTATGGCTTTAGTCTTGTCAAAGGGAAAGCGAACCACCCAATGGAGGACTATCATGTTGCAAAACTTGTCCAGGTCAGAGGGCAAGAGCTTGGACTGTTTGCTATATACGATGGGCATTTAGGAGACAGTGTGCCAGCCTATCTACAAAAGAATCTCTTCCCTAATATCTTAAAAGATGAGGACTTTTGGACTGATACAGCTAGATCCATTGTAAAAGCTTATGAGGCAACAGATAAAGCAATTCTTTCTCAGAGTCCTGATTTGGGACGAGGTGGATCAACTGCAGTGACTGCCATTGTTATAAATAATCAGAAGTTATGGATAGCTAATGTTGGAGATTCACGGGCAGTTCTGTCAAAGGATGGGCAGGCAATACAAATGAGTATAGATCATGAGCCCAATACTGAGAGGGACAGCATCGAGGACAGAGGTGGCTTTGTCTCTAACATGCCAGGAGATGTTGCCAGAGTGAACGGCCAGCTTGCCGTTTCTCGAGCATTTGGAGACAAAAATCTCAAATCACACTTGCGATCCGATCCTGACGTACAACAGGCTAACATTGACCCAGAGACAGAGCTTTTGATTCTTGCAAGTGATGGTCTATGGAAGGTGATGGCAAATCAAGAGGCAGTAGATATTGCAAGAAGGATAAAGGATCCACAAAGAGCAGCCAAACAGCTAGCAGCAGAAGCATTGAACAGAGACAGCAAGGATGATATTTCTTGCATTGTAGTTCGTTTCAAGTCATGA 849 0.4452 MDNLCCFNSVTQVVGGRSSSSSGKGRSHQSHVKYGFSLVKGKANHPMEDYHVAKLVQVRGQELGLFAIYDGHLGDSVPAYLQKNLFPNILKDEDFWTDTARSIVKAYEATDKAILSQSPDLGRGGSTAVTAIVINNQKLWIANVGDSRAVLSKDGQAIQMSIDHEPNTERDSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVQQANIDPETELLILASDGLWKVMANQEAVDIARRIKDPQRAAKQLAAEALNRDSKDDISCIVVRFKS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0135 282 CDD PP2Cc 32 280 IPR001932 -
Prci11g0135 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Prci11g0135 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Prci11g0135 282 SMART PP2C_4 29 278 IPR001932 -
Prci11g0135 282 PANTHER PROTEIN PHOSPHATASE 26 280 IPR015655 GO:0004722|GO:0006470
Prci11g0135 282 FunFam Probable protein phosphatase 2C 39 23 281 - -
Prci11g0135 282 Gene3D - 16 282 IPR036457 -
Prci11g0135 282 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Prci11g0135 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0135 Prci-Chr11 1883343 1889395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0135 1 281 PP2C-type Phosphatase Gene Family AT1G22280 71.429 3.69e-150 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0135 K17506 - pvy:116142160 467.618