Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0121 ATGGATGATAACGAGATGGGGATGTGGCTGACGTGGAAGGATGTGTGGGTGACGTCAGCTTCTTCTTCTTCTTCAAGTGGGAAGAAGAAGAAGAAGAAAGGGATGGATGGAAGCAGAACAATACTTGAAGGTCTCAGTGGTTATGCAAAGCCTGGTCAGCTCTTGGCCATCATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATGCTTTAGCAGGGAGGTTAGGTTCAAACACAAAGCAAACAGGAGAGATTCTTATTAATGGCCACAAACAAGCACTGGCTTATGGGACCTCGGCATATGTGACACAAGATGACACTTTACTCACAACCCTAACTGTGGGAGAAGCAGTGTACTACTCAGCTCAGCTTCAACTACCAGACACAATGTCAAAGGAAGAGAAAAAGGAGAGAGCAGAGTTCACTATAAGAGAAATGGGTCTGCAAGACGCCATTAACACCAGAATTGGTGGTTGGGGTTGCAAGGGAATCAGTGGAGGCCAGAAGAGAAGAGTCAGTATCTGCATTGAGATCCTCACACGTCCGAGACTTCTCTTCCTCGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTTATGAGCAGAATCGCAAGCCTTGATCGAAAGGATGGGATTCAAAGGACCATTATTGCTTCCATTCATCAGCCTAGTACTGAAGTGTTTCAACTCTTTGATAATCTTTGTCTTCTTTCTTCAGGAAAAACTTTGTTCTTTGGTCCTGCTTCTGCTGCAACTGAGTTCTTTACTTCAAATGGCTTTCCTTGTCCAGCTCTCCAAAATCCATCTGATCATTTCCTGAAAACTATAAACAAGGATTTTGATTATCAGGACATTGAACTCGGTTTAAGTGGAACTCAAAGGAAGCCTACAGAAGAGGCAATTGAAATTCTTGTGAAGTCATACAAGTCTTCTGATTTGAACAAACAAGTTCAAGCAGAAGTAGCAGCACTGACTACACAGGAAAGTGGAATGGCGGAGAAGATGAAGAAGAGGAAGAGAGGGCATGCAAGCTTCCATACTCAGTGTGTTGTTCTTACGAAGAGATCACTTGTGAACATGCGTCGCGATGTAGGCTATTACTGGTTACGCCTTGTCATATACATGGGCGTTGCTCTAGGTTTGTCCACTGTGTTCTATGACTTGGGCATGAGCATAGGATCCATTCAGAGGTGCCCTTCTCATGTTTGTGTCTTCATTCTTAACTTTCATGACCATTGGTGGATTCCCTTCTTTTGTGGAGGACATGAAGGTATTTCAGAGAGAAAGGTTAAATGGACACTACGGAGTGACAACCTATGTGATAGGAAACACATTATCTTCAATCCCTTGCTTGTTACTCGTTACTCTCATTCCTGGAGCCATAGCCTACTACCTTCCTGGCCTTCAGAAATCCGCTGA 1431 0.443 MDDNEMGMWLTWKDVWVTSASSSSSSGKKKKKKGMDGSRTILEGLSGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTKQTGEILINGHKQALAYGTSAYVTQDDTLLTTLTVGEAVYYSAQLQLPDTMSKEEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGKTLFFGPASAATEFFTSNGFPCPALQNPSDHFLKTINKDFDYQDIELGLSGTQRKPTEEAIEILVKSYKSSDLNKQVQAEVAALTTQESGMAEKMKKRKRGHASFHTQCVVLTKRSLVNMRRDVGYYWLRLVIYMGVALGLSTVFYDLGMSIGSIQRCPSHVCVFILNFHDHWWIPFFCGGHEGISERKVKWTLRSDNLCDRKHIIFNPLLVTRYSHSWSHSLLPSWPSEIR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0121 476 Pfam ABC transporter 43 193 IPR003439 GO:0005524
Prci11g0121 476 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524|GO:0016887
Prci11g0121 476 SMART AAA_5 51 245 IPR003593 GO:0016887
Prci11g0121 476 FunFam ABC transporter G family member 11 8 311 - -
Prci11g0121 476 Gene3D - 28 263 IPR027417 -
Prci11g0121 476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 268 IPR003439 GO:0005524
Prci11g0121 476 Pfam ABC-2 type transporter 225 352 IPR043926 GO:0140359
Prci11g0121 476 CDD ABCG_EPDR 35 250 - -
Prci11g0121 476 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 8 410 - -
Prci11g0121 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 259 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0121 Prci-Chr11 1810510 1815798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0121 41 229 Calmodulin-binding Proteins AT2G36910 30.612 4.58e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0121 K05681 - qsa:O6P43_031630 565.844