Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0120 ATGGATGATAACGAGATGGGGATGTGGCTGACGTGGAAGGATGTGTGGGTGACGTCAGCTTCTTCTTCTTCTTCAAGTGGGAAGAAGAAGAAGAAGAAAGGGATGGATGGAAGCAGAACAATACTTGAAGGTCTCAGTGGTTATGCAAAGCCTGGTCAGCTCTTGGCCATCATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATGCTTTAGCAGGGAGGTTAGGTTCAAACACAAAGCAAACAGGAGAGATTCTTATTAATGGCCACAAACAAGCACTGGCTTATGGGACCTCGGCATATGTGACACAAGATGACACTTTACTCACAACCCTAACTGTGGGAGAAGCAGTGTACTACTCAGCTCAGCTTCAACTACCAGACACAATGTCAAAGGAAGAGAAAAAGGAGAGAGCAGAGTTCACTATAAGAGAAATGGGTCTGCAAGACGCCATTAACACCAGAATTGGTGGTTGGGGTTGCAAGGGAATCAGTGGAGGCCAGAAGAGAAGAGTCAGTATCTGCATTGAGATCCTCACACGTCCGAGACTTCTCTTCCTCGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTTATGAGCAGAATCGCAAGCCTTGATCGAAAGGATGGGATTCAAAGGACCATTATTGCTTCCATTCATCAGCCTAGTACTGAAGTGTTTCAACTCTTTGATAATCTTTGTCTTCTTTCTTCAGGAAAAACTTTGTTCTTTGGTCCTGCTTCTGCTGCAACTGAGTTCTTTACTTCAAATGGCTTTCCTTGTCCAGCTCTCCAAAATCCATCTGATCATTTCCTGAAAACTATAAACAAGGATTTTGATTATCAGGACATTGAACTCGGTTTAAGTGGAACTCAAAGGAAGCCTACAGAAGAGGCAATTGAAATTCTTGTGAAGTCATACAAGTCTTCTGATTTGAACAAACAAGTTCAAGCAGAAGTAGCAGCACTGACTACACAGGAAAGTGGAATGGCGGAGAAGATGAAGAAGAGGAAGAGAGGGCATGCAAGCTTCCATACTCAGTGTGTTGTTCTTACGAAGAGATCACTTGTGAACATGCGTCGCGATGTAGGCTATTACTGGTTACGCCTTGTCATATACATGGGCGTTGCTCTAGGTTTGTCCACTGTGTTCTATGACTTGGGCATGAGCATAGGATCCATTCAGGATAGAGGTGCCCTTCTCATGTTTGTGTCTTCATTCTTAACTTTCATGACCATTGGTGGATTCCCTTCTTTTGTGGAGGACATGAAGGTATTTCAGAGAGAAAGGTTAAATGGACACTACGGAGTGACAACCTATGTGATAGGAAACACATTATCTTCAATCCCTTGCTTGTTACTCGTTACTCTCATTCCTGGAGCCATAGCCTACTACCTTCCTGGCCTTCAGAAATCCGCTGAACACTTCGTCTGCTTCTGTTGCATCCTTTTTGCGTGTCTCATGCTGGTTGAGAGCCTCATGATGATAGTGGCTAGCGTCGTTCCTAACTTCCTCATGGGAATCATAACTGGTGCTGGTATTCAAGGCATCATGATGCTTGCAGGAGGCTTCTTTAGACTCCCCAATGACCTCCCTAGAATCTTCTGGAAGTACCCTCTTTCTTACGTCGCCTTCCATAGATATGCCTTCCAAGGCATGTTCAAGAATGAGTTTCAGGGACTTAGGTTTGGGAGTGTAAGTGGGGAAGAGATCCTAAGAAGCAAATGGGAAGTAGACATGACCTATTCAAAGTGGGTTGATCTTTGGATTCTTTTGGGCATGATTGTTTTGTACAGAGTTGTGTTTTTGGCGATCATCAAAGGGAAGGAGAAGATGAAGCCTGCTCTTGCTTCTTTGCTTTCTGGGCCTCCTAAGACAAGCATTCAGATCATGGCAAATCCAAATGCTACTCCTTTACATCAAGGGATTGCATGA 1950 0.4446 MDDNEMGMWLTWKDVWVTSASSSSSSGKKKKKKGMDGSRTILEGLSGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTKQTGEILINGHKQALAYGTSAYVTQDDTLLTTLTVGEAVYYSAQLQLPDTMSKEEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGKTLFFGPASAATEFFTSNGFPCPALQNPSDHFLKTINKDFDYQDIELGLSGTQRKPTEEAIEILVKSYKSSDLNKQVQAEVAALTTQESGMAEKMKKRKRGHASFHTQCVVLTKRSLVNMRRDVGYYWLRLVIYMGVALGLSTVFYDLGMSIGSIQDRGALLMFVSSFLTFMTIGGFPSFVEDMKVFQRERLNGHYGVTTYVIGNTLSSIPCLLLVTLIPGAIAYYLPGLQKSAEHFVCFCCILFACLMLVESLMMIVASVVPNFLMGIITGAGIQGIMMLAGGFFRLPNDLPRIFWKYPLSYVAFHRYAFQGMFKNEFQGLRFGSVSGEEILRSKWEVDMTYSKWVDLWILLGMIVLYRVVFLAIIKGKEKMKPALASLLSGPPKTSIQIMANPNATPLHQGIA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0120 649 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524|GO:0016887
Prci11g0120 649 Gene3D - 28 263 IPR027417 -
Prci11g0120 649 SMART AAA_5 51 245 IPR003593 GO:0016887
Prci11g0120 649 Pfam ABC transporter 43 193 IPR003439 GO:0005524
Prci11g0120 649 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 268 IPR003439 GO:0005524
Prci11g0120 649 Pfam ABC-2 type transporter 351 563 IPR013525 GO:0016020|GO:0140359
Prci11g0120 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 8 624 - -
Prci11g0120 649 Pfam ABC-2 type transporter 225 327 IPR043926 GO:0140359
Prci11g0120 649 FunFam ABC transporter G family member 11 8 311 - -
Prci11g0120 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 259 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0120 Prci-Chr11 1810510 1816224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0120 41 229 Calmodulin-binding Proteins AT2G36910 30.256 6.73e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0120 K05681 - gmx:100813462 946.421