LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g0118	ATGAAGTTCAACATTGCGAATCCCACGACTGGATGCCAGAAGAAGCTGGAGATCGATGACGATCAGAAGCTGCGAGCTTTTTGGGACAAGCGTATCTCACAGGAGGTCAGCGGTGATGCTTTGGGCGAGGAATTCAAAGGCTATGTCTTCAAGATCACTGGTGGTTGTGACAAACAAGGTTTTCCAATGAAACAGGGAGTGCTGACCCCTGGTCGTGTTCGGCTCTTGCTCCACAGAGGAACTCCTTGCTTCCGAGGATATGGAAGGCGCAATGGTGAACGCAGGAGAAAGTCTGTGCGTGGGTGCATTGTGAGCCCGGACCTCTCTGTTCTGAACTTGGTTATTGTGAAGAAGGGTGAAAATGATTTGCCTGGACTTACTGACATTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAAATCCGCAAGCTGTTTAACCTCTCCAAGGAGGATGATGTGAGGAAGTATGTCAACACCTATCGCCGTACCTTCACAACAAAATCTGGCAAAAAGGTGAGCAAGGCCCCTAAGATTCAAAGACTGGTCACACCTTTGACCCTCCAAAGGAAGCGTGCAAGGATTGCAGATAAGAAGAAGAGAATTGCCAAGGCGAAAGCAGAAGCAGCCGAGTATCAGAAACTTCTTGCCTCGAGGTTGAAGGAGCAGAGGGAGCGCCGAAGTGAGAGTTTGGCCAAGAGGAGATCCAGGCTTTCTAGTGCCAAGCAATCCGTCGCAGCATAG	747	0.498	MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKRRSRLSSAKQSVAA	248

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g0118	248	MobiDBLite	consensus disorder prediction	219	237	-	-
	Prci11g0118	248	MobiDBLite	consensus disorder prediction	219	248	-	-
	Prci11g0118	248	PIRSF	RPS6e	1	248	IPR014401	GO:0003735\|GO:0005840\|GO:0006412
	Prci11g0118	248	SMART	Ribosomal_S6e_2	1	128	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Prci11g0118	248	Coils	Coil	189	223	-	-
	Prci11g0118	248	PANTHER	40S RIBOSOMAL PROTEIN S6	1	240	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Prci11g0118	248	Pfam	Ribosomal protein S6e	1	128	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Prci11g0118	248	ProSitePatterns	Ribosomal protein S6e signature.	52	63	IPR018282	GO:0003735\|GO:0005840\|GO:0006412
	Prci11g0118	248	Gene3D	-	133	234	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g0118	Prci-Chr11	1731169	1733985	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g0118	1	242	Cytoplasmic Ribosomal Protein Gene Family	AT5G10360	73.554	1.58e-120	340

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g0118	K02991		-	sind:105176438	410.223