Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0101 ATGGACAATAGTAGCAGCAGAGCTGAAGCCGAACGGTGGCTCTACACCGCTAATAAGCTCCTCAGCGCCAGTGATCTGCACGGCGCTAGGTCTTTTGCAGTTCGAGCTCGTGAGTCTGATCCTACATTTGACGCCTCGGAGTTGCTCCTCGCTGTCATCGACACCCTCCTCGCTGGCGAGAATCGGATCAATGGCCTCCATGACTGGTATAGCATCCTCCAGATTCTGCCTTACACTCATAACATCGAGTACATCGCTTCGCAGTACCGTCGTCTCGCTCTCCTCCTCGACCCTCACCGTAACCCTTTTGCGTTCTCTAGCCACGCGTTCACACTCGTTCATGACGCGTGGTCTGTACTCTCCAGTCCCGCAAAGAAGGCTATGTACGACAACGAGCTGCGTATGGTCACCGGCCCACCTCCTACAGCCCCTCCCCCACAACCTGCTCCGGTGGCAACGGTGCAAGCGCCGAACCCGGTTCCGACTTCGAATCCGATTCCGACTCCCAATCCACCCCTTGTCCAGCGGCCACCACAGCAGCAGCGAAGTCCGGCAAGGCGGGGCCCAAGGTCGAAAGATGGGAAGGCGGCTGCCGGCGAGCGTAGGCCGAGCCCTAACATTGCCACGACGGAGCCGACCCCACAAGCTCGGACGAGTGACCCAGTGGTGTCGGAGACGGGTTCGAGTTTCTGGACGGCGTGCCCATATTGTTACGTTATGTACGAGTACCCGGAGTTGTACGAGGACTGTACCCTAAGGTGCCAGAGCTGTAGAAGGGGATTCCATGCGGTGAGGGTACGGACGCCGCCGGTGGCGGGGAAAGATTCGTATTATTGCTGTTGGGGGTTTTTCCCGTTAGGGTTTTCTGGGGATTTCAGACACATAAGTGGGACTAATTCCAAGTGGAACCCATTCTCTGCAATGTTTGCATGCCCTTTGAGAGGAGGAGGAGGAGGAGGAGGAGGAGCATCTAACAAGGGTTCTCGGAGAGGTCCTTGGGTTTTTCATGATGATGAAGCTGCTGCTGCATTCATTGAACTTTCTGATCCAAGTGATGATGATTCTGATGATGCTGATTGGGGAGCGAGGAGCGAGAGGGCAAAGAAGAGGGCTAAGAACAAAGGAAAAACCTCTGGTAATGCTAGTGGTGAAGTTAGAAGAGCTTTTTCTGAAAGAACTAGGAGAGGGAGCCAGAGTGGGTCAGGACATGCCAATTTAGAAAATGGCGTGGTCGGAGACGGTGGGTCTGGTGTGCCTAATACTGTGAGGGCAGAATTGAGTAAAAAAGCCGCGAATAGCTCTAGAAGAAGGGGTGCAGGGAATCTGGGGAAATTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAAGAGCCAGCCCCAGCAGTGAGAGATGGTAATGTAGCTGGAAATGCTGAGGAAAATATAGAAGGGAATGCATTTTTTGAAGGTCTTGATGAATTCCTCAATAGCTTGCCCATCCTCAATGTTGTAGCAGATGACAAGAAATCGTCCCATTTGTTGATCAATGTTCTTGACTTAATAGCACCTTTCAATTTGAAGAATGTAAGTTTATGTTTTAATCGGGACCTGGCTACATTCCTTTAA 1605 0.5221 MDNSSSRAEAERWLYTANKLLSASDLHGARSFAVRARESDPTFDASELLLAVIDTLLAGENRINGLHDWYSILQILPYTHNIEYIASQYRRLALLLDPHRNPFAFSSHAFTLVHDAWSVLSSPAKKAMYDNELRMVTGPPPTAPPPQPAPVATVQAPNPVPTSNPIPTPNPPLVQRPPQQQRSPARRGPRSKDGKAAAGERRPSPNIATTEPTPQARTSDPVVSETGSSFWTACPYCYVMYEYPELYEDCTLRCQSCRRGFHAVRVRTPPVAGKDSYYCCWGFFPLGFSGDFRHISGTNSKWNPFSAMFACPLRGGGGGGGGASNKGSRRGPWVFHDDEAAAAFIELSDPSDDDSDDADWGARSERAKKRAKNKGKTSGNASGEVRRAFSERTRRGSQSGSGHANLENGVVGDGGSGVPNTVRAELSKKAANSSRRRGAGNLGKLDLNVEFSNEVEEPAPAVRDGNVAGNAEENIEGNAFFEGLDEFLNSLPILNVVADDKKSSHLLINVLDLIAPFNLKNVSLCFNRDLATFL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0101 534 MobiDBLite consensus disorder prediction 135 226 - -
Prci11g0101 534 MobiDBLite consensus disorder prediction 346 421 - -
Prci11g0101 534 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Prci11g0101 534 MobiDBLite consensus disorder prediction 206 226 - -
Prci11g0101 534 SUPERFAMILY Chaperone J-domain 63 134 IPR036869 -
Prci11g0101 534 SMART dnaj_3 67 125 IPR001623 -
Prci11g0101 534 CDD DnaJ 68 121 IPR001623 -
Prci11g0101 534 Gene3D DnaJ domain 65 138 IPR036869 -
Prci11g0101 534 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 381 - -
Prci11g0101 534 Pfam DnaJ domain 68 130 IPR001623 -
Prci11g0101 534 MobiDBLite consensus disorder prediction 138 178 - -
Prci11g0101 534 CDD PHD_SF 234 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0101 Prci-Chr11 1520695 1524025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0101 9 501 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 40.079 4.12e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0101 - - pcin:129296576 971.074