Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0100 ATGGACAATAGTAGCAGCAGAGCTGAAGCCGAACGGTGGCTCTACACCGCTAATAAGCTCCTCAGCGCCAGTGATCTGCACGGCGCTAGGTCTTTTGCAGTTCGAGCTCGTGAGTCTGATCCTACATTTGACGCCTCGGAGTTGCTCCTCGCTGTCATCGACACCCTCCTCGCTGGCGAGAATCGGATCAATGGCCTCCATGACTGGTATAGCATCCTCCAGATTCTGCCTTACACTCATAACATCGAGTACATCGCTTCGCAGTACCGTCGTCTCGCTCTCCTCCTCGACCCTCACCGTAACCCTTTTGCGTTCTCTAGCCACGCGTTCACACTCGTTCATGACGCGTGGTCTGTACTCTCCAGTCCCGCAAAGAAGGCTATGTACGACAACGAGCTGCGTATGGTCACCGGCCCACCTCCTACAGCCCCTCCCCCACAACCTGCTCCGGTGGCAACGGTGCAAGCGCCGAACCCGGTTCCGACTTCGAATCCGATTCCGACTCCCAATCCACCCCTTGTCCAGCGGCCACCACAGCAGCAGCGAAGTCCGGCAAGGCGGGGCCCAAGGTCGAAAGATGGGAAGGCGGCTGCCGGCGAGCGTAGGCCGAGCCCTAACATTGCCACGACGGAGCCGACCCCACAAGCTCGGACGAGTGACCCAGTGGTGTCGGAGACGGGTTCGAGTTTCTGGACGGCGTGCCCATATTGTTACGTTATGTACGAGTACCCGGAGTTGTACGAGGACTGTACCCTAAGGTGCCAGAGCTGTAGAAGGGGATTCCATGCGGTGAGGGTACGGACGCCGCCGGTGGCGGGGAAAGATTCGTATTATTGCTGTTGGGGGTTTTTCCCGTTAGGGTTTTCTGGGGATTTCAGACACATAAGTGGGACTAATTCCAAGTGGAACCCATTCTCTGCAATGTTTGCATGCCCTTTGAGAGGAGGAGGAGGAGGAGGAGGAGGAGCATCTAACAAGGGTTCTCGGAGAGGTCCTTGGGTTTTTCATGATGATGAAGCTGCTGCTGCATTCATTGAACTTTCTGATCCAAGTGATGATGATTCTGATGATGCTGATTGGGGAGCGAGGAGCGAGAGGGCAAAGAAGAGGGCTAAGAACAAAGGAAAAACCTCTGGTAATGCTAGTGGTGAAGTTAGAAGAGCTTTTTCTGAAAGAACTAGGAGAGGGAGCCAGAGTGGGTCAGGACATGCCAATTTAGAAAATGGCGTGGTCGGAGACGGTGGGTCTGGTGTGCCTAATACTGTGAGGGCAGAATTGAGTAAAAAAGCCGCGAATAGCTCTAGAAGAAGGGGTGCAGGGAATCTGGGGAAATTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAAGAGCCAGCCCCAGCAGTGAGAGATGGTAATGTAGCTGGAAATGCTGAGGAAAATATAGAAGGGAATGCATTTTTTGAAGGTCTTGATGAATTCCTCAATAGCTTGCCCATCCTCAATGTTGTAGCAGATGACAAGTTTGAATGGAGACCTGTGCTTGTGTGA 1530 0.5333 MDNSSSRAEAERWLYTANKLLSASDLHGARSFAVRARESDPTFDASELLLAVIDTLLAGENRINGLHDWYSILQILPYTHNIEYIASQYRRLALLLDPHRNPFAFSSHAFTLVHDAWSVLSSPAKKAMYDNELRMVTGPPPTAPPPQPAPVATVQAPNPVPTSNPIPTPNPPLVQRPPQQQRSPARRGPRSKDGKAAAGERRPSPNIATTEPTPQARTSDPVVSETGSSFWTACPYCYVMYEYPELYEDCTLRCQSCRRGFHAVRVRTPPVAGKDSYYCCWGFFPLGFSGDFRHISGTNSKWNPFSAMFACPLRGGGGGGGGASNKGSRRGPWVFHDDEAAAAFIELSDPSDDDSDDADWGARSERAKKRAKNKGKTSGNASGEVRRAFSERTRRGSQSGSGHANLENGVVGDGGSGVPNTVRAELSKKAANSSRRRGAGNLGKLDLNVEFSNEVEEPAPAVRDGNVAGNAEENIEGNAFFEGLDEFLNSLPILNVVADDKFEWRPVLV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0100 509 MobiDBLite consensus disorder prediction 135 226 - -
Prci11g0100 509 MobiDBLite consensus disorder prediction 346 421 - -
Prci11g0100 509 SUPERFAMILY Chaperone J-domain 63 134 IPR036869 -
Prci11g0100 509 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Prci11g0100 509 MobiDBLite consensus disorder prediction 206 226 - -
Prci11g0100 509 SMART dnaj_3 67 125 IPR001623 -
Prci11g0100 509 CDD DnaJ 68 121 IPR001623 -
Prci11g0100 509 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 381 - -
Prci11g0100 509 Pfam DnaJ domain 68 130 IPR001623 -
Prci11g0100 509 MobiDBLite consensus disorder prediction 138 178 - -
Prci11g0100 509 CDD PHD_SF 234 279 - -
Prci11g0100 509 Gene3D DnaJ domain 65 138 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0100 Prci-Chr11 1520271 1524023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0100 9 503 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.922 1.70e-97 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0100 - - pcin:129296576 907.131