Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0057 ATGAACTCTCAACTCTCTGTGATGCTGAGATTGCTCCCTTGGTCTTCTCTTCCACTGGCAAGCTCTTTGATTATGCTAGCTCAAGCATTCAGCAGGAAATTGAATGGTATGATCAACATTCAGCCATTCAAATACAAGCTTAAAGGTGATGAGAACGAGCTGCACAAGGCAGTAGTAGCAGAAAAGACTCGTGAATTGAGGCAGCTGAATGACGAAGAGCTTCAAGGATGCACACTTGAAGAATTGCAGACGCTAGAGGAAAGACTTGAAAGGGGCTTGTCCCGTGTTTCAAAAACAAAGGATGAAAGAATCTTAAAACAAATCAATGCACTTAAGAGAAAGGGAATCCAACTCAAGGAAGAAAACCAAAGAATGAAGCAGAGCCTTGTGCATGGACAAGGGCAGTCTTCTGAGTCCATCATCATTTGCAGTTCATCTGACATTAATCCTCCTCAAGACTCTGATAGTTCTGATACATCTCTCAGGCTTGGGCAATTAATTAGTTTATCTACTTTGTTGTAA 522 0.4157 MNSQLSVMLRLLPWSSLPLASSLIMLAQAFSRKLNGMINIQPFKYKLKGDENELHKAVVAEKTRELRQLNDEELQGCTLEELQTLEERLERGLSRVSKTKDERILKQINALKRKGIQLKEENQRMKQSLVHGQGQSSESIIICSSSDINPPQDSDSSDTSLRLGQLISLSTLL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0057 173 Pfam K-box region 59 128 IPR002487 GO:0003700|GO:0005634|GO:0006355
Prci11g0057 173 Coils Coil 79 102 - -
Prci11g0057 173 Coils Coil 108 128 - -
Prci11g0057 173 ProSiteProfiles K-box domain profile. 45 136 IPR002487 GO:0003700|GO:0005634|GO:0006355
Prci11g0057 173 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0057 Prci-Chr11 922271 929106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0057 59 164 MADS-box Gene Family AT2G22540 41.176 5.04e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0057 - - pcin:129285573 176.022