Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0032 ATGGAATTAGATTTGTCCTCCAATACATTGAGTGGAACAATTCCACTTGAGATTTCAAACATGAGGGCACTTACACTCTTGAATTTATCAAGAAATCAAATTTCAGGAAACATCCCTGAATCTATGGGTGGCTTGAAGACTTTGTTGAACCTATCTTTGGCTCACAACAAATTCCAGGGGCCTATTCCTAAATCACTTGGTGGCATGATAAGTATTGAGTTCTTGGATCTTTCTCAAAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCTCTTGTCTATATGAAATTGAATATAATGATTGATGTGGCTTCAGCACTAGAATATCTTCATAGTGGTTCCTCTACACCAGTGGTTCATTGTGATGTGAAGCCAAGCAATGTTTTATTGGATGAAAATATGGTGGCACATCTCAGTGATTTTGGTATTGCCAAATTATTAGGTGACACAGAATCAGAAATTTACACCAAGACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGCTATTTCTAGTAAAGGAGATGTGTATAGTTATGGCATTTTGCTCATGGAAATGCTGACGAGGAAAAATCCAACAGATGACCTGTTTAATGAAAGTCTAAGTTTGAAGGATTGGGTTAGCAAATCAACTCCTCATTCAATAATCAACATTTTAGATGTCATTTGCTGCAAGGAGACAATCAAAATATTGGCAAAATATTGTCACATGTGTCATCAATATTGA 744 0.3642 MELDLSSNTLSGTIPLEISNMRALTLLNLSRNQISGNIPESMGGLKTLLNLSLAHNKFQGPIPKSLGGMISIEFLDLSQNYLSGVIPKSLESLVYMKLNIMIDVASALEYLHSGSSTPVVHCDVKPSNVLLDENMVAHLSDFGIAKLLGDTESEIYTKTLATIGYMAPEYGSKGAISSKGDVYSYGILLMEMLTRKNPTDDLFNESLSLKDWVSKSTPHSIINILDVICCKETIKILAKYCHMCHQY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0032 247 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 1 90 - -
Prci11g0032 247 Gene3D Ribonuclease Inhibitor 3 89 IPR032675 -
Prci11g0032 247 SMART serkin_6 24 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0032 247 SUPERFAMILY Protein kinase-like (PK-like) 96 221 IPR011009 -
Prci11g0032 247 Pfam Protein kinase domain 99 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0032 247 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 92 - -
Prci11g0032 247 Pfam Leucine Rich Repeat 72 93 IPR001611 GO:0005515
Prci11g0032 247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Prci11g0032 247 ProSiteProfiles Protein kinase domain profile. 1 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0032 247 Pfam Leucine rich repeat 1 58 IPR001611 GO:0005515
Prci11g0032 247 SUPERFAMILY L domain-like 3 96 - -
Prci11g0032 247 Gene3D Transferase(Phosphotransferase) domain 1 93 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0032 Prci-Chr11 486071 487595 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0032 1 98 Receptor kinase-like Gene Family AT3G47570 38.776 2.13e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g0032 Pkinase 4.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0032 - - pcin:129285570 489.96