Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0030 ATGATCAGTATTGAGTTCTTAGATCTTTCCCAAAATCATTTGACCAGGATTATTCCAAAGTCTTTAGAGTCTCTTGTGTATCTAAAATTCATTAACCTTTCATACAATTCCTTACATGGAGAAATTGCAAATGGTGGGCCTTTTCAAAACTTTACAGCCCAGTCTTTTATGATGATTGGAGATCTTTGTGGGAGCCCTCAACTACAAGTCCAACCTTGTAGGAAAGAAAACAAGCACTTGTCAACTAAAATGAAGCTTTTGATCAAGTGCTTTTTGCCTATCATAGCTAAAATTTCTATAGTGTTATGCATAAATTTTCTAAAGCAAAAGCAACACCGTGTTGATGAGTCATCCAAGAGGGAGATGGTAAATTTGGAAACACCTATTAGGATATCCTATTATGATCTCCCAAATGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCTCAAGAAGTTTTGCATCAGTATACAAAGCCATTCTCTCAAATGGAAAGATAGTTGCAGTTAAAGTGTTTAACTTGGACTTGGAAGAAGCATTAAGGAGCTTTGAGATTGAATGTGCTATCAAATGCAACTTACATCATCGCAATCTCATTAAGATAATCAGTAGTTGTTCAAATGATGATTTTAAATCTTTGATAATGGAATATATGTCAAATGGGAGTCTTGACAGATGGTTGTACTCTCACAACTATTGTTTAGATATCCTGCAAAGGTTGGATATAATGATTGATGTGGCCGCGGCATTAGAATATCTTCATCATGGTTCTTCTACACTAGTTGTTCATTGTGATGTTAAACCAAGTAATGTTTTGTTGGATGAGGATATGGTAGCTCATCTTAGTGATTTTGGCATTGCCAAGCTGTTTGGTCAAAGACAGTTGGAAATTTATACCAAAACTTTTGCTTCTATTGGCTACATGGCTCCAGTTTGGTGTGAGACAAACATCACCACCGACAAATCTTCACTTCTTGCTCTCAAACCTTATATCTTCTTGGATCCACACGATTTTTTAGCTAATTGGTCTACCTCTTCTTCTCCATGTAATTGGATTGGGGTCACTTGTAATACTCGCCATGGAAGGGTTCATTCATTGAATCTTAATGGCATGGATCTCAGGGGTATCATATCTCCACAGTTGGGAAATCTATCATTTCTTGTTGAACTTGACCTTGGAAACAATAGATTTCACGGTCACATACCAAAAGAGTTAGGTCAATTGCGAAGGCTAAAACTGCTCGACTTAAGCTACAATGAATTTGATGAAGAAGTTCCAATATGGATAGGAGATTTGTCAATACCACAATATTTGAGTCTTCACAATAATAGTCTTAATGGATTGATTCCATTATCCATATGCAACTTGTCAAAATTGGAGGCTTTGGATCTGAGAGCTAATAACTTCATCGAGGGGAACATTCCAATTGATATTGGAAGACTCAAGTACTTGAAGTTTTTAGGATTTGGGAAGAACAAGCTCTCGGGAATCATACCTCAGACAATTTCTAATTTATCTTCACTTGAGTCCTTGAGTGTGTCTTATAATACTTTGTCAGGAGGCATTCCCAGTGAAATTGGCAACCTTCCACTATTACAGACAATGTATCTTTCAAACAATCAGCTTTCTGGTTCTATACCATCTTCAATATTCAATAGTTCAATGTTGCAAAATATTGAACTTAATGAAAATCATTTGTCTGGTAGACTCCCAAAAAATATATGTTTTGGGCTTCCAAAACTTGAAAGCTTTTTTGTGTATCTAAATGATTTGTCAGGTGAAATTCCCTCAATTTGGCATCAATGCAAAGAGTTGGTTGATTTAGAATTAAGTGAGAATAAATTCAAAAGAGGATTCATGCCTAGCGACATTGGAAATTTGACCAACCTCCAATTCTTACATCTTTACAACAGCAACTTGGAAGGTGAAATTCCTCTATTTCTTTTTAACATGTCTTCTTTGAGAAGATTTGCCATTGGCTTCAATAATTTATATGGCAATTTGCCAAAACAGATGTGCCGTCAACTGCCTTTAATAGAAGGCATCGAGGTGAATGGGAATCAATTAAAAGGAAACATTCCAAAATCAATAAGTAATTGCACACATTTAAGTGAACTATTCTTGAACCTCAATTCATTTACAGGTTTTGTACCCTAG 2160 0.3574 MISIEFLDLSQNHLTRIIPKSLESLVYLKFINLSYNSLHGEIANGGPFQNFTAQSFMMIGDLCGSPQLQVQPCRKENKHLSTKMKLLIKCFLPIIAKISIVLCINFLKQKQHRVDESSKREMVNLETPIRISYYDLPNGTNGFDESNLLGSRSFASVYKAILSNGKIVAVKVFNLDLEEALRSFEIECAIKCNLHHRNLIKIISSCSNDDFKSLIMEYMSNGSLDRWLYSHNYCLDILQRLDIMIDVAAALEYLHHGSSTLVVHCDVKPSNVLLDEDMVAHLSDFGIAKLFGQRQLEIYTKTFASIGYMAPVWCETNITTDKSSLLALKPYIFLDPHDFLANWSTSSSPCNWIGVTCNTRHGRVHSLNLNGMDLRGIISPQLGNLSFLVELDLGNNRFHGHIPKELGQLRRLKLLDLSYNEFDEEVPIWIGDLSIPQYLSLHNNSLNGLIPLSICNLSKLEALDLRANNFIEGNIPIDIGRLKYLKFLGFGKNKLSGIIPQTISNLSSLESLSVSYNTLSGGIPSEIGNLPLLQTMYLSNNQLSGSIPSSIFNSSMLQNIELNENHLSGRLPKNICFGLPKLESFFVYLNDLSGEIPSIWHQCKELVDLELSENKFKRGFMPSDIGNLTNLQFLHLYNSNLEGEIPLFLFNMSSLRRFAIGFNNLYGNLPKQMCRQLPLIEGIEVNGNQLKGNIPKSISNCTHLSELFLNLNSFTGFVP 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0030 719 SMART LRR_typ_2 628 652 IPR003591 -
Prci11g0030 719 SMART LRR_typ_2 1 24 IPR003591 -
Prci11g0030 719 SMART LRR_typ_2 530 554 IPR003591 -
Prci11g0030 719 SMART LRR_typ_2 506 529 IPR003591 -
Prci11g0030 719 SMART LRR_typ_2 385 409 IPR003591 -
Prci11g0030 719 SMART LRR_typ_2 457 482 IPR003591 -
Prci11g0030 719 SUPERFAMILY L domain-like 3 45 - -
Prci11g0030 719 Gene3D Ribonuclease Inhibitor 1 81 IPR032675 -
Prci11g0030 719 Gene3D Ribonuclease Inhibitor 528 719 IPR032675 -
Prci11g0030 719 Gene3D Ribonuclease Inhibitor 473 527 IPR032675 -
Prci11g0030 719 Pfam Leucine rich repeat N-terminal domain 320 358 IPR013210 -
Prci11g0030 719 PANTHER OS04G0122200 PROTEIN 544 641 - -
Prci11g0030 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Prci11g0030 719 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 622 718 - -
Prci11g0030 719 Gene3D Transferase(Phosphotransferase) domain 1 219 321 - -
Prci11g0030 719 Pfam Leucine rich repeat 490 543 IPR001611 GO:0005515
Prci11g0030 719 SUPERFAMILY Protein kinase-like (PK-like) 123 319 IPR011009 -
Prci11g0030 719 SMART serkin_6 143 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0030 719 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 318 470 - -
Prci11g0030 719 Gene3D Phosphorylase Kinase; domain 1 104 218 - -
Prci11g0030 719 Gene3D Ribonuclease Inhibitor 322 472 IPR032675 -
Prci11g0030 719 ProSiteProfiles Protein kinase domain profile. 143 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0030 719 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 477 575 - -
Prci11g0030 719 Pfam Protein kinase domain 145 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0030 719 FunFam Os07g0541700 protein 219 306 - -
Prci11g0030 719 SUPERFAMILY RNI-like 366 716 - -
Prci11g0030 719 Pfam Leucine Rich Repeat 4 25 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0030 Prci-Chr11 398706 413794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0030 324 719 Receptor kinase-like Gene Family AT5G46330 38.442 5.01e-64 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g0030 Pkinase 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0030 - K13420 pcin:129285563 1425.22