Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0027 ATGGTAGTGTCTTTAACAAGAAACAATTTAAAAGGTAGACTTCCATCATCCATCGGCAATTGCACGTTGTTGGAATATTTATATCTAGAACAAAACTCCTTAACAGGAGAAATTCCATCATCTCTCTTTCGAAGTTCTTCTTTAAGAGAAGTGTATTTATCAGAGAACAGTTTAAATGGCAGTCTCCCAATGTCAATTGGAAATCAGACGATGGTGGAATATTTATATCTTGATTACAACTCCTTTACAGGTGAAATTCCTCAATCTATTTTCAACATGCCTTCTTTGATAGAGGTTTATCTTTCCAACAACCATTTCAATGGTAATTTGCCAGAAGAGATATGTCAAGCGCTCTCTTCACTTGAAGTCTTTGTGGTTGTTAATAATCATTTAGAAGGAAACATTCCAAAATCAATAAGTAATTGCTCCTCTTTGCTAGCCTTGTTTTTGGATATGAACTCATTTTCAGGATTTATACCCAAGGAGATAGGCAATCTTGATAAGCTTGAAGAATTGGATTTCTCATCTAATAATTTCAATGGACCCTTTCCTTCCCATATATTCAACATTTCCACATTGACATTTCTCTCCCTGGAAAATAATTCCTTCTCTGGTTTTCTCCCATCAAATTTTGGAATTGGCCTTCCCAACCTGAATAAATTGCAGTTGGGACATAATCAATTTATTGGACAAATTCCAAATAGCATCTCAAATGCTTCTGAGCTCATCATGTTAGATTTGCCAGGTAATAAATTTAGTGGAGTTATACCCAATGTACTCGGAAATCTAACAAAACTGATAGCATTATATCTTGATGGGAATGATTTGAATGGGCCGATTCCAAATACAATTAACAGATTGCAAAGCCTTCAACATTTAAGCCTCAGTAACAACAGATTGCAAGGGCCGATCATAAACGAATTGTGCCAAATCAAAAGTTTGAGCGAGTTGTATCTAGCCAACAACATGTTTTCAGGAATGATTCCAAGGTGCCTCACAAATACTTCTTTGCGAAAGTTGGATTTTAGCTCAAACAAATTAATTTCTCATGTACCCATTTCTCTTTGGAGTCTTGAAGATATTTTGGTCTTAGACTTATCCTCCAATGCATTGAGTGGAAGAATTCCTCCCGAGGTATCAAACTTGAAATCAATTATAGTCTTGAAATTGTCAAGAAATCAAATTACAGGAAACATTCCTACAACCATGGGTGGCTTGCAAACTTTGCTAAACCTATCTTTGGCTCACAACAAATTACAAGGGCCTATTCCTGAATCACTTGGTGGCATGGTAAGCTTGGAGTTCTTGGATCTCTCTCAAAATCACTTGTCTGGTTTGATTCCAAAGTCATTGGAGTCACTTGTCTATCTAAAATACATTAACCTTTCATATAATTTGTTGCAAGGGGAAATTCCAAATGGTGGGCCTTTTGAAAATTTTACATTTGATTCGTTTATGATGAATAAAGATCTTTGTGGAAAGTCCCAACTACTAGTCCGGCCATGTAGAAAAGGAAATATACATAACTCAAGTAAGGTTATGTTGTTGTTAGAATGCTCATTGCCTGTCGTGGTTGTCATTTTTGTTGCTTTATGCATAATCCTTATTATAATAAAGCATAAGAGAGATCATGTTAATGATTCAGCCAACAAGGATTTAATACATTTTGAGACACAAATTAGGATATCCTATTATGAGCTTTTACGAGGAACAAATGGGTTTAATGAGAGTAATCTTCTTGGAAAGGGAAGTTTTGGATCAGTCTATAGAGCTGTTTTGCCAAATGGAAAGATGGTTGCTGTCAAAGTATTTAACTCAAGTCTAGAAGAAACATCAAGGAGTTTTGACACTGAATGTGCTACTTTGCGCAATTTACGTCATCGCAATCTCACTAAGATAATCAGTGATTGCTCAAATGGTGAATTTAAATCCATAATAATGGAATTCATGTCAAATGGGAGTCTTGACAAATGGTTACACTCTAATAACTATTATTTAGACATCCTACAAAGGTTGGATATTATGATTGATGTGGCAGCTGCTTTAGAGTATCTGCACCATGGTTCTCCTACACCAGTTGTTCATTGTGATATAAAACCAAGCAATGTATTGTTGGATGAAGATATGGTGGCTCACCTTAGTGATTTTGGCATTGCCAAATTGTTAGGTGAAGGACAAATGGAAATTTATACCAAGACTTTGGCTACGATAGGCTATATGGCACCAGAGTATGGATCAAAAGGAATTGCTTCCATTAAAGGAGATGTGTATAGTTACGGTATTTTGTTGATGGAAATGCTTACAAGAAAGAAACCAACCAACGAGATGTTTGTTGAAGGTATGTGTTTGAAAGATTGGGTTTGCAAATCAACACCTCATTCAATTATCAATATCGTAGATGCCAATTTGCTGCCCAGTGATAGTCAAAATATTGACGGCATATTGTCACATATATCATCACTTCTTGAATTGGCCTTAGATTGTTGTTTTGATGTACCTGAAGCACGGATTAATATGGAAGATGTGGTGGTAATACTGAAAAAAACAAAGGCTCGTTTATCAAAAGCGCTAAGAGTTACACCACTAACTACTTGA 2595 0.3576 MVVSLTRNNLKGRLPSSIGNCTLLEYLYLEQNSLTGEIPSSLFRSSSLREVYLSENSLNGSLPMSIGNQTMVEYLYLDYNSFTGEIPQSIFNMPSLIEVYLSNNHFNGNLPEEICQALSSLEVFVVVNNHLEGNIPKSISNCSSLLALFLDMNSFSGFIPKEIGNLDKLEELDFSSNNFNGPFPSHIFNISTLTFLSLENNSFSGFLPSNFGIGLPNLNKLQLGHNQFIGQIPNSISNASELIMLDLPGNKFSGVIPNVLGNLTKLIALYLDGNDLNGPIPNTINRLQSLQHLSLSNNRLQGPIINELCQIKSLSELYLANNMFSGMIPRCLTNTSLRKLDFSSNKLISHVPISLWSLEDILVLDLSSNALSGRIPPEVSNLKSIIVLKLSRNQITGNIPTTMGGLQTLLNLSLAHNKLQGPIPESLGGMVSLEFLDLSQNHLSGLIPKSLESLVYLKYINLSYNLLQGEIPNGGPFENFTFDSFMMNKDLCGKSQLLVRPCRKGNIHNSSKVMLLLECSLPVVVVIFVALCIILIIIKHKRDHVNDSANKDLIHFETQIRISYYELLRGTNGFNESNLLGKGSFGSVYRAVLPNGKMVAVKVFNSSLEETSRSFDTECATLRNLRHRNLTKIISDCSNGEFKSIIMEFMSNGSLDKWLHSNNYYLDILQRLDIMIDVAAALEYLHHGSPTPVVHCDIKPSNVLLDEDMVAHLSDFGIAKLLGEGQMEIYTKTLATIGYMAPEYGSKGIASIKGDVYSYGILLMEMLTRKKPTNEMFVEGMCLKDWVCKSTPHSIINIVDANLLPSDSQNIDGILSHISSLLELALDCCFDVPEARINMEDVVVILKKTKARLSKALRVTPLTT 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0027 864 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 213 - -
Prci11g0027 864 SUPERFAMILY Protein kinase-like (PK-like) 555 846 IPR011009 -
Prci11g0027 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Prci11g0027 864 ProSiteProfiles Protein kinase domain profile. 574 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0027 864 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 650 858 - -
Prci11g0027 864 Gene3D Ribonuclease Inhibitor 166 504 IPR032675 -
Prci11g0027 864 Gene3D Ribonuclease Inhibitor 1 165 IPR032675 -
Prci11g0027 864 Gene3D Transferase(Phosphotransferase) domain 1 650 859 - -
Prci11g0027 864 Pfam Protein kinase domain 575 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0027 864 SUPERFAMILY RNI-like 4 331 - -
Prci11g0027 864 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 214 506 - -
Prci11g0027 864 SMART LRR_typ_2 93 117 IPR003591 -
Prci11g0027 864 SMART LRR_typ_2 358 382 IPR003591 -
Prci11g0027 864 SMART LRR_typ_2 118 142 IPR003591 -
Prci11g0027 864 SMART LRR_typ_2 166 190 IPR003591 -
Prci11g0027 864 SMART LRR_typ_2 21 45 IPR003591 -
Prci11g0027 864 SMART LRR_typ_2 287 308 IPR003591 -
Prci11g0027 864 SMART LRR_typ_2 311 334 IPR003591 -
Prci11g0027 864 SMART LRR_typ_2 215 239 IPR003591 -
Prci11g0027 864 SMART LRR_typ_2 430 453 IPR003591 -
Prci11g0027 864 SUPERFAMILY L domain-like 278 492 - -
Prci11g0027 864 SMART serkin_6 574 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0027 864 SMART LRR_sd22_2 287 310 - -
Prci11g0027 864 SMART LRR_sd22_2 334 350 - -
Prci11g0027 864 SMART LRR_sd22_2 430 451 - -
Prci11g0027 864 SMART LRR_sd22_2 166 192 - -
Prci11g0027 864 Gene3D Phosphorylase Kinase; domain 1 536 649 - -
Prci11g0027 864 PANTHER OS04G0122200 PROTEIN 164 263 - -
Prci11g0027 864 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Prci11g0027 864 Pfam Leucine rich repeat 216 276 IPR001611 GO:0005515
Prci11g0027 864 Pfam Leucine rich repeat 409 467 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0027 Prci-Chr11 323272 328058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0027 3 860 Receptor kinase-like Gene Family AT3G47570 36.561 3.55e-170 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g0027 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0027 - K13420 pcin:129285519 1108.98