Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0014 ATGGCTACTGAGGACTATGAACTGGTCAAGACTATTGATGACACTAAAGAAGCTTCCTCCCTTATTGTTAGAGTGATTAGGAAGTGGTGCCAGCTCTATAAGAGTCCCCCTCATCATTTAGCATGTATTATGTTCGTTTTTATAGATGAAGAGGGCAATAAGATACATGCTGAAGTCACAAACAAACAACTTCATGAGCAGTATAAGCGAGAGCCATCTGAAGGAGACATCATTTACATTGAAAATTTCACAATTTCACCTAACACATGGCCTTATAGACCCACATCTCATCCATGGAGGCTGCAGTTCCATCCTAACACTTACATTAGACCTCATGATGCTGAGCTTCCACGCAATTCATTCAACTTTGTCTGTTTTACAAAACTTCACGAGGACATGAAAAAAAAAGAACTTAACACTGAAGTTCTTATTGATGTCATTGGCTTTTTGAAATCATTTGGTGATCTGATAGACTCAAGGACAGATAATGCAGCACAAAATCGTTTAAGCTATACTTTAGCAGATGAAGAGGATGTCACTGTTAACTGCTTATTATGGGGAGAGACTGCAACACAAACATATTGGGCCAAGCAGGATGACATGGACCCACCAATTATTGTATTGATGCAATTTGCTAGGATCAGTGTGAAAAATGGAATTTTGCAACTGTCAAACTCCTACACTGCTACTAGGATCACCTTTAACCCTGACATTCCAGAGGCAAAGGACCTACTTGAAAGGCTTCAACAGTCAACAAACACATCATCTCTTAGCTTTACACAAACAATTCAGTGTGAAACAAGTCAAAATTCTTCCCTTTCACTTCTACAATTTCCTGACAGATTCCCAATATCACATATTGCTCATATTGACGAGGAAAAGGAATTTCTGATTAAGGGAACCATCAAGAAACTACAAACAGGAAATGGTTGGACTTATGATGGTTGTGACATCTGCACCAGTAAACCAATGGAGCAAAACAATAAACAATTTTGCAATATCTATTTCGAATCCACTACACCATCTCTGATGCCTCTGGATATATATCAGTTGTCTTCTTTGATAGACATGCTGTGGAACTACTCTACACAACCGCTACTTGTTACTGGATTTCTTCCAACAGCTTTACTTTTTTCCACCATGTTAACTTTAAAGCAAGCAAAGTTGCATTCCTTTCCCAAGCAACTTAATTCTCTGGTTGGAAGAACTATGGTCTTGAAGGTCAAAGTAACAAAGTACAATATTCAGCACCGCATGACCAGTCTAAGTGTATCTCAGTACACAGAGAATGAGAACTTGCTTTCCAAGTTTACCTACACAATTGAACAGGAAATGGCTCCTTCATTCATTGTAAATTCTGCTGATAACTTGCAACAGATTGCTTCTTCACAAGTTTCAGACACAATGTCATTCCAGACAACACCAACACAATCCACTACTTCTGCTGACCAAGATACAGCACATGAGCAAGGAGAAAATGATGACATGCCAATTGCACAGCTGTTCACTACTCCAACAACTAAGGGAAAGAAAAGACATGCTGTCAAGAAAGAAACTTTAAAAGATCACTGCCCAGGCATCTCAGATATGCCAACACCTTTTTTCTCCACAACCAAGCCACGCAAAACAATCAAGCAAGAGAAGATATATTAG 1653 0.3896 MATEDYELVKTIDDTKEASSLIVRVIRKWCQLYKSPPHHLACIMFVFIDEEGNKIHAEVTNKQLHEQYKREPSEGDIIYIENFTISPNTWPYRPTSHPWRLQFHPNTYIRPHDAELPRNSFNFVCFTKLHEDMKKKELNTEVLIDVIGFLKSFGDLIDSRTDNAAQNRLSYTLADEEDVTVNCLLWGETATQTYWAKQDDMDPPIIVLMQFARISVKNGILQLSNSYTATRITFNPDIPEAKDLLERLQQSTNTSSLSFTQTIQCETSQNSSLSLLQFPDRFPISHIAHIDEEKEFLIKGTIKKLQTGNGWTYDGCDICTSKPMEQNNKQFCNIYFESTTPSLMPLDIYQLSSLIDMLWNYSTQPLLVTGFLPTALLFSTMLTLKQAKLHSFPKQLNSLVGRTMVLKVKVTKYNIQHRMTSLSVSQYTENENLLSKFTYTIEQEMAPSFIVNSADNLQQIASSQVSDTMSFQTTPTQSTTSADQDTAHEQGENDDMPIAQLFTTPTTKGKKRHAVKKETLKDHCPGISDMPTPFFSTTKPRKTIKQEKIY 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0014 550 CDD RPA1_DBD_B_like 145 248 - -
Prci11g0014 550 Gene3D - 120 250 IPR012340 -
Prci11g0014 550 Gene3D - 251 439 IPR012340 -
Prci11g0014 550 SUPERFAMILY Nucleic acid-binding proteins 19 112 IPR012340 -
Prci11g0014 550 MobiDBLite consensus disorder prediction 466 499 - -
Prci11g0014 550 Pfam Domain of unknown function DUF223 46 137 IPR003871 -
Prci11g0014 550 CDD RPA1_DBD_A_like 20 107 - -
Prci11g0014 550 Gene3D - 6 111 IPR012340 -
Prci11g0014 550 MobiDBLite consensus disorder prediction 522 550 - -
Prci11g0014 550 SUPERFAMILY Nucleic acid-binding proteins 136 250 IPR012340 -
Prci11g0014 550 MobiDBLite consensus disorder prediction 466 486 - -
Prci11g0014 550 PANTHER OS03G0429900 PROTEIN 15 499 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0014 Prci-Chr11 87121 89789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0014 23 325 Core DNA Replication Machinery Family AT5G08020 26.498 1.64e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0014 - - pcin:129285553 1098.19