Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0001 ATGGTGAAAAAAGAAGTGGCGGATCCATTTTTCTTCGTTGACGTTGCATTCCACGCTTGGTCGAGCTCGCCGTCGGACGCCGTCCCTACCTGGTTGGAGAAGTTTCAAACCCTAGGGCTTCGTCTTCTTCCAAAATTCGGTTATCTTAAAGCTGGTACCTGGAATATAATGTCTGAGGATGCTAGCCCAATGTTGGTAGTTTATGATGACCCCTCAGACCAACGATCCCTATCTTTGGATGATACAAGCAGCGCAGAGGAATCACCAGATGAAACCAGGCTTTCGTTGGAGACTACTAATGATTCAATTCCATATATTGGGCAAAGATTTAGCACTCATGATTCTGCATATGAATTTTATAGTGAATTTGCCAAGCAGTGTGGGTTCTCAATTCGACGACACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTAACTAGACGCTATTTTGTTTGCCATCGTGCTGGTAACACTCCTGTCAAAACATCAACTGAAAGTAAACCTCAAAGGAATCGAAAATCTTCCCGATGTGGATGCCAGGCTTACATGCGTATAAGCAAGACAACAGAATTAGGTACTCCAGAATGGCGTGTTACTGGTTTTGCCAACCACCATAATCATGAACTTTTAGAGCCAAATCAAGTTCGATTTCTTCCTGCATACAGAACTATTTCTGATTCAGACAAAAGCCGAATCCTGATGTATGCTAAAACTGGGATTTCTGTCCATCAAATGATGCGGCTTATGGAGCTTGAGAAGTGTGTGGAACCTGGATATCTACCTTTTACTGAAAAGGATGTGAGGAATTTACTTCAGTCATTTAGGAAATTAGAACCAGAAGAGGAAAGTATAGATTTATTAAGAATGTGCAGAAATATTAAGGATAAAGACCCTAATTTCAAATTTGAGTTCACACTTGATTCAAACAACTGTTTAGAGAATATAGCCTGGTCATATGCCTCATCAATACAGTCATATGATATCTTTGGTGATGCAGTGGTGTTTGATACAACACACCGCCTAACTGCATTTGACATGCCATTGGGTATATGGGTTGGAATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTACGAGAAGAAAACTTGAGGTCATATTCTTGGGCATTGAAGGCTTTCTTAGGGTTTATGAATGGGAAGCCTCCACAGACAATATTAACGGACCAAAACATGTGTCTCAAAGAAGCATTAGCCATGGAAATGCCAGCAACTAAACATGCTCTCTGCATATGGATGATTGTAGCAAAATTCCCTTCTTGGTTTAGTGCTGTTCTAGGAGAACGTTACAATGAGTGGAAGGCTGAATTTTATAGACTTTACAATCTTGAGTCAGTTGAGGATTTTGAGCTAGGTTGGAGGGATATGGTCAGTTCTTTTGCGCTGCATGCCAGTAGACACATTGCTAATTTATATACTTTACGCACGCTCTGGGCATTGCCATTCCTGAGAAGCCATTTTTTTGCGGGAATGACTACAACCGGTCAATCAAAGTCAATTAATGCTTTCATTCAACGATTTCTGAGTGCACAGACTCGGCTCGCACACTTTGTTGAGCAGGTAGCTGTTGCTGTGGATTTCAAAGATCAAACTGGAGAACAACAAACAATGCAACAGAACCTCCAAAATATTTGCCTCAAAACTGGAGCTCCTATGGAGTCACATGCTGCCGCAATCCTCACTCCTTTTGCCTTTTCAAAGCTTCAGGAACAACTTGTGTTGGCTGCTCATTATGCATCTTTTCCATTGGAAGATGGTTTCCTTGTGAGGCACCATACAAAAGCCGAGGGTGGTCGCAGAGTGTATTGGGCTCCTAGGGAAGGAATGATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTCTGCAGGCATGCTCTTAGAGTTCTTTCAACAGGAAATTGTTTTCAGATCCCAGATAGATATCTTCCTTCTCGTTGGCGTCGAATCAGCTTGACCTCTGCTAAGACTCCTCATAGCACACCGAAGGATCATGCTGAAAGAGTACAATTATTACAAAATATGGTTTCTGCTCTTATCACAGAATCTGCCAAGTCAAAGGAAAGATTGGATCTTGCTACAGAACAAGTTTCCCTCCTCCTATCTCGAATAAGGGAGCAACCTGTTCCGTTACAAGGTGTCAGAGATATTTCTGGCATTGGTAGGAGTGTTTGA 2208 0.4207 MVKKEVADPFFFVDVAFHAWSSSPSDAVPTWLEKFQTLGLRLLPKFGYLKAGTWNIMSEDASPMLVVYDDPSDQRSLSLDDTSSAEESPDETRLSLETTNDSIPYIGQRFSTHDSAYEFYSEFAKQCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTELGTPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKSRILMYAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLEPEEESIDLLRMCRNIKDKDPNFKFEFTLDSNNCLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLRSYSWALKAFLGFMNGKPPQTILTDQNMCLKEALAMEMPATKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVSSFALHASRHIANLYTLRTLWALPFLRSHFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAAAILTPFAFSKLQEQLVLAAHYASFPLEDGFLVRHHTKAEGGRRVYWAPREGMISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISLTSAKTPHSTPKDHAERVQLLQNMVSALITESAKSKERLDLATEQVSLLLSRIREQPVPLQGVRDISGIGRSV 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0001 735 Pfam MULE transposase domain 334 426 IPR018289 -
Prci11g0001 735 Pfam FAR1 DNA-binding domain 118 211 IPR004330 -
Prci11g0001 735 SMART 26again6 620 647 IPR006564 GO:0008270
Prci11g0001 735 MobiDBLite consensus disorder prediction 72 97 - -
Prci11g0001 735 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 98 708 IPR031052 GO:0006355
Prci11g0001 735 ProSiteProfiles Zinc finger SWIM-type profile. 609 645 IPR007527 GO:0008270
Prci11g0001 735 Pfam SWIM zinc finger 611 643 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0001 Prci-Chr11 5206 10118 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci11g0001 MULE 5.6e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0001 - - qsa:O6P43_012134 1262.28